Genome mining reveals unlocked bioactive potential of marine Gram-negative bacteria
Background Antibiotic resistance in bacteria spreads quickly, overtaking the pace at which
new compounds are discovered and this emphasizes the immediate need to discover new …
new compounds are discovered and this emphasizes the immediate need to discover new …
Molecular networking and pattern-based genome mining improves discovery of biosynthetic gene clusters and their products from Salinispora species
Genome sequencing has revealed that bacteria contain many more biosynthetic gene
clusters than predicted based on the number of secondary metabolites discovered to date …
clusters than predicted based on the number of secondary metabolites discovered to date …
Challenges and triumphs to genomics-based natural product discovery
Genome sequencing is rapidly changing the field of natural products research by providing
opportunities to assess the biosynthetic potential of strains prior to chemical analysis or …
opportunities to assess the biosynthetic potential of strains prior to chemical analysis or …
Dissecting bottromycin biosynthesis using comparative untargeted metabolomics
WJK Crone, NM Vior, J Santos‐Aberturas… - Angewandte …, 2016 - Wiley Online Library
Bottromycin A2 is a structurally unique ribosomally synthesized and post‐translationally
modified peptide (RiPP) that possesses potent antibacterial activity towards multidrug …
modified peptide (RiPP) that possesses potent antibacterial activity towards multidrug …
Metabologenomics: correlation of microbial gene clusters with metabolites drives discovery of a nonribosomal peptide with an unusual amino acid monomer
For more than half a century the pharmaceutical industry has sifted through natural products
produced by microbes, uncovering new scaffolds and fashioning them into a broad range of …
produced by microbes, uncovering new scaffolds and fashioning them into a broad range of …
Mapping microbial response metabolomes for induced natural product discovery
DK Derewacz, BC Covington, JA McLean… - ACS chemical …, 2015 - ACS Publications
Intergeneric microbial interactions may originate a significant fraction of secondary
metabolic gene regulation in nature. Herein, we expose a genomically characterized …
metabolic gene regulation in nature. Herein, we expose a genomically characterized …
Cryptic or silent? The known unknowns, unknown knowns, and unknown unknowns of secondary metabolism
PA Hoskisson, RF Seipke - MBio, 2020 - Am Soc Microbiol
Microbial natural products, particularly those produced by filamentous Actinobacteria,
underpin the majority of clinically used antibiotics. Unfortunately, only a few new antibiotic …
underpin the majority of clinically used antibiotics. Unfortunately, only a few new antibiotic …
Discovery of Toxin-Degrading Enzymes with Positive Unlabeled Deep Learning
D Zhang, H Xing, D Liu, M Han, P Cai, H Lin… - ACS …, 2024 - ACS Publications
Identifying functional enzymes for the catalysis of specific biochemical reactions is a major
bottleneck in the de novo design of biosynthesis and biodegradation pathways …
bottleneck in the de novo design of biosynthesis and biodegradation pathways …
Interspecies interactions stimulate diversification of the Streptomyces coelicolor secreted metabolome
Soils host diverse microbial communities that include filamentous actinobacteria
(actinomycetes). These bacteria have been a rich source of useful metabolites, including …
(actinomycetes). These bacteria have been a rich source of useful metabolites, including …
Single cell genome amplification accelerates identification of the apratoxin biosynthetic pathway from a complex microbial assemblage
RV Grindberg, T Ishoey, D Brinza, E Esquenazi… - PloS one, 2011 - journals.plos.org
Filamentous marine cyanobacteria are extraordinarily rich sources of structurally novel,
biomedically relevant natural products. To understand their biosynthetic origins as well as …
biomedically relevant natural products. To understand their biosynthetic origins as well as …