Genomic basis for natural product biosynthetic diversity in the actinomycetes

M Nett, H Ikeda, BS Moore - Natural product reports, 2009 - pubs.rsc.org
Covering: up to mid-2009 The phylum Actinobacteria hosts diverse high G+ C, Gram-
positive bacteria that have evolved a complex chemical language of natural product …

Discovery of the leinamycin family of natural products by mining actinobacterial genomes

G Pan, Z Xu, Z Guo, Hindra, M Ma… - Proceedings of the …, 2017 - National Acad Sciences
Nature's ability to generate diverse natural products from simple building blocks has inspired
combinatorial biosynthesis. The knowledge-based approach to combinatorial biosynthesis …

The secreted metabolome of Streptomyces chartreusis and implications for bacterial chemistry

CHR Senges, A Al-Dilaimi… - Proceedings of the …, 2018 - National Acad Sciences
Actinomycetes are known for producing diverse secondary metabolites. Combining
genomics with untargeted data-dependent tandem MS and molecular networking, we …

Phylogenomic analysis of natural products biosynthetic gene clusters allows discovery of arseno-organic metabolites in model streptomycetes

P Cruz-Morales, JF Kopp… - Genome biology and …, 2016 - academic.oup.com
Natural products from microbes have provided humans with beneficial antibiotics for
millennia. However, a decline in the pace of antibiotic discovery exerts pressure on human …

Linking genomics and metabolomics to chart specialized metabolic diversity

JJJ van Der Hooft, H Mohimani… - Chemical Society …, 2020 - pubs.rsc.org
Microbial and plant specialized metabolites constitute an immense chemical diversity, and
play key roles in mediating ecological interactions between organisms. Also referred to as …

Coculture of marine invertebrate-associated bacteria and interdisciplinary technologies enable biosynthesis and discovery of a new antibiotic, keyicin

N Adnani, MG Chevrette, SN Adibhatla… - ACS chemical …, 2017 - ACS Publications
Advances in genomics and metabolomics have made clear in recent years that microbial
biosynthetic capacities on Earth far exceed previous expectations. This is attributable, in …

SANDPUMA: ensemble predictions of nonribosomal peptide chemistry reveal biosynthetic diversity across Actinobacteria

MG Chevrette, F Aicheler, O Kohlbacher… - …, 2017 - academic.oup.com
Nonribosomally synthesized peptides (NRPs) are natural products with widespread
applications in medicine and biotechnology. Many algorithms have been developed to …

Correlating chemical diversity with taxonomic distance for discovery of natural products in myxobacteria

T Hoffmann, D Krug, N Bozkurt, S Duddela… - Nature …, 2018 - nature.com
Some bacterial clades are important sources of novel bioactive natural products. Estimating
the magnitude of chemical diversity available from such a resource is complicated by issues …

Production of specialized metabolites by Streptomyces coelicolor A3 (2)

G Van Keulen, PJ Dyson - Advances in applied microbiology, 2014 - Elsevier
The actinomycetes are well-known bioactive natural product producers, comprising the
Streptomycetes, the richest drug-prolific family in all kingdoms, producing therapeutic …

Native metabolomics identifies the rivulariapeptolide family of protease inhibitors

R Reher, AT Aron, P Fajtová, P Stincone… - Nature …, 2022 - nature.com
The identity and biological activity of most metabolites still remain unknown. A bottleneck in
the exploration of metabolite structures and pharmaceutical activities is the compound …