Noninvasive assessment of organ-specific and shared pathways in multi-organ fibrosis using T1 mapping

V Nauffal, MDR Klarqvist, MC Hill, DF Pace… - Nature Medicine, 2024 - nature.com
Fibrotic diseases affect multiple organs and are associated with morbidity and mortality. To
examine organ-specific and shared biologic mechanisms that underlie fibrosis in different …

Genetics of myocardial interstitial fibrosis in the human heart and association with disease

V Nauffal, P Di Achille, MDR Klarqvist… - Nature …, 2023 - nature.com
Myocardial interstitial fibrosis is associated with cardiovascular disease and adverse
prognosis. Here, to investigate the biological pathways that underlie fibrosis in the human …

[HTML][HTML] A novel multi-network approach reveals tissue-specific cellular modulators of fibrosis in systemic sclerosis

JN Taroni, CS Greene, V Martyanov, TA Wood… - Genome medicine, 2017 - Springer
Abstract Background Systemic sclerosis (SSc) is a multi-organ autoimmune disease
characterized by skin fibrosis. Internal organ involvement is heterogeneous. It is unknown …

FibROAD: a manually curated resource for multi-omics level evidence integration of fibrosis research

YZ Sun, YF Hu, Y Zhang, SY Wei, BL Yang, YP Xu… - Database, 2022 - academic.oup.com
Organ fibrosis represents a vital health threat that substantially contributes to yearly mortality
rates. While a considerable amount of research has been conducted on fibrosis, these …

Scalable querying of human cell atlases via a foundational model reveals commonalities across fibrosis-associated macrophages

G Heimberg, T Kuo, D DePianto, T Heigl, N Diamant… - BioRxiv, 2023 - biorxiv.org
Single-cell RNA-seq (scRNA-seq) studies have profiled over 100 million human cells across
diseases, developmental stages, and perturbations to date. A singular view of this vast and …

[HTML][HTML] Identifying common genes and networks in multi-organ fibrosis

KE Wenzke, C Cantemir-Stone, J Zhang… - AMIA Summits on …, 2012 - ncbi.nlm.nih.gov
Fibroproliferative diseases of organs are poorly understood and generally lack effective anti-
fibrotic treatments. Our goal was to identify the key regulatory factors in pathologic fibrosis …

Common pathway signature in lung and liver fibrosis

E Makarev, E Izumchenko, F Aihara, PT Wysocki… - Cell Cycle, 2016 - Taylor & Francis
Fibrosis, a progressive accumulation of extracellular matrix components, encompasses a
wide spectrum of distinct organs, and accounts for an increasing burden of morbidity and …

[HTML][HTML] Genomics of human fibrotic diseases: disordered wound healing response

RC Stone, V Chen, J Burgess, S Pannu… - International journal of …, 2020 - mdpi.com
Fibrotic disease, which is implicated in almost half of all deaths worldwide, is the result of an
uncontrolled wound healing response to injury in which tissue is replaced by deposition of …

[HTML][HTML] The body-wide transcriptome landscape of disease models

S Kozawa, R Ueda, K Urayama, F Sagawa, S Endo… - IScience, 2018 - cell.com
Virtually all diseases affect multiple organs. However, our knowledge of the body-wide
effects remains limited. Here, we report the body-wide transcriptome landscape across 13 …

Integrated single cell analysis of human lung fibrosis resolves cellular origins of predictive protein signatures in body fluids

CH Mayr, LM Simon, G Leuschner, M Ansari, PE Geyer… - MedRxiv, 2020 - medrxiv.org
Single cell genomics enables characterization of disease specific cell states, while
improvements in mass spectrometry workflows bring the clinical use of body fluid proteomics …