Minor introns are embedded molecular switches regulated by highly unstable U6atac snRNA

I Younis, K Dittmar, W Wang, SW Foley, MG Berg… - Elife, 2013 - elifesciences.org
Eukaryotes have two types of spliceosomes, comprised of either major (U1, U2, U4, U5, U6)
or minor (U11, U12, U4atac, U6atac;< 1%) snRNPs. The high conservation of minor introns …

[PDF][PDF] A two-layered targeting mechanism underlies nuclear RNA sorting by the human exosome

G Wu, M Schmid, L Rib, P Polak, N Meola, A Sandelin… - Cell Reports, 2020 - cell.com
Degradation of transcripts in human nuclei is primarily facilitated by the RNA exosome. To
obtain substrate specificity, the exosome is aided by adaptors; in the nucleoplasm, those …

[PDF][PDF] Endogenous miRNA sponge lincRNA-RoR regulates Oct4, Nanog, and Sox2 in human embryonic stem cell self-renewal

Y Wang, Z Xu, J Jiang, C Xu, J Kang, L Xiao, M Wu… - Developmental cell, 2013 - cell.com
The embryonic stem cell (ESC) transcriptional and epigenetic networks are controlled by a
multilayer regulatory circuitry, including core transcription factors (TFs), posttranscriptional …

[PDF][PDF] The nuclear poly (A)-binding protein interacts with the exosome to promote synthesis of noncoding small nucleolar RNAs

JF Lemay, A D'Amours, C Lemieux, DH Lackner… - Molecular cell, 2010 - cell.com
Summary Poly (A)-binding proteins (PABPs) are important to eukaryotic gene expression. In
the nucleus, the PABP PABPN1 is thought to function in polyadenylation of pre-mRNAs …

[PDF][PDF] Distinct processing of lncRNAs contributes to non-conserved functions in stem cells

CJ Guo, XK Ma, YH Xing, CC Zheng, YF Xu, L Shan… - Cell, 2020 - cell.com
Long noncoding RNAs (lncRNAs) evolve more rapidly than mRNAs. Whether conserved
lncRNAs undergo conserved processing, localization, and function remains unexplored. We …

MiCEE is a ncRNA-protein complex that mediates epigenetic silencing and nucleolar organization

I Singh, A Contreras, J Cordero, K Rubio, S Dobersch… - Nature …, 2018 - nature.com
The majority of the eukaryotic genome is transcribed into noncoding RNAs (ncRNAs), which
are important regulators of different nuclear processes by controlling chromatin structure …

[PDF][PDF] MicroRNA gene regulatory pathways in the establishment and maintenance of ESC identity

NJ Martinez, RI Gregory - Cell stem cell, 2010 - cell.com
Understanding the molecular foundations of embryonic stem cell (ESC) self-renewal and
pluripotency will facilitate therapeutic exploitation of these remarkable cells. Here we …

Long noncoding RNA: genome organization and mechanism of action

VS Akhade, D Pal, C Kanduri - Long Non Coding RNA Biology, 2017 - Springer
For the last four decades, we have known that noncoding RNAs maintain critical
housekeeping functions such as transcription, RNA processing, and translation. However, in …

Enhancer RNAs and regulated transcriptional programs

MTY Lam, W Li, MG Rosenfeld, CK Glass - Trends in biochemical sciences, 2014 - cell.com
A large portion of the human genome is transcribed into RNAs without known protein-coding
functions, far outnumbering coding transcription units. Extensive studies of long noncoding …

Transcriptional and post-transcriptional gene regulation by long non-coding RNA

IM Dykes, C Emanueli - Genomics, Proteomics and …, 2017 - academic.oup.com
Advances in genomics technology over recent years have led to the surprising discovery
that the genome is far more pervasively transcribed than was previously appreciated. Much …