[HTML][HTML] Diversity analysis of cotton (Gossypium hirsutum L.) germplasm using the CottonSNP63K Array

LL Hinze, AM Hulse-Kemp, IW Wilson, QH Zhu… - BMC Plant …, 2017 - Springer
Background Cotton germplasm resources contain beneficial alleles that can be exploited to
develop germplasm adapted to emerging environmental and climate conditions. Accessions …

Genetic diversity and structure of elite cotton germplasm (Gossypium hirsutum L.) using genome-wide SNP data

XT Ai, YJ Liang, JD Wang, JY Zheng, ZL Gong, JP Guo… - Genetica, 2017 - Springer
Cotton (Gossypium spp.) is the most important natural textile fiber crop, and Gossypium
hirsutum L. is responsible for 90% of the annual cotton crop in the world. Information on …

Development of a 63K SNP Array for Cotton and High-Density Mapping of Intraspecific and Interspecific Populations of Gossypium spp.

AM Hulse-Kemp, J Lemm, J Plieske… - G3: Genes …, 2015 - academic.oup.com
High-throughput genotyping arrays provide a standardized resource for plant breeding
communities that are useful for a breadth of applications including high-density genetic …

Genomic divergence in cotton germplasm related to maturity and heterosis

S He, G Sun, L Huang, D Yang, P Dai… - Journal of Integrative …, 2019 - Wiley Online Library
Commercial varieties of upland cotton (Gossypium hirsutum) have undergone extensive
breeding for agronomic traits, such as fiber quality, disease resistance, and yield. Cotton …

[HTML][HTML] Development and bin mapping of gene-associated interspecific SNPs for cotton (Gossypium hirsutum L.) introgression breeding efforts

AM Hulse-Kemp, H Ashrafi, X Zheng, F Wang… - BMC genomics, 2014 - Springer
Abstract Background Cotton (Gossypium spp.) is the largest producer of natural fibers for
textile and is an important crop worldwide. Crop production is comprised primarily of G …

A Long‐Read Transcriptome Assembly of Cotton (Gossypium hirsutum L.) and Intraspecific Single Nucleotide Polymorphism Discovery

H Ashrafi, AM Hulse‐Kemp, F Wang, SS Yang… - The plant …, 2015 - Wiley Online Library
Upland cotton (Gossypium hirsutum L.) has a narrow germplasm base, which constrains
marker development and hampers intraspecific breeding. A pressing need exists for high …

[HTML][HTML] High-density 80 K SNP array is a powerful tool for genotyping G. hirsutum accessions and genome analysis

C Cai, G Zhu, T Zhang, W Guo - BMC genomics, 2017 - Springer
Background High-throughput genotyping platforms play important roles in plant genomic
studies. Cotton (Gossypium spp.) is the world's important natural textile fiber and oil crop …

Analysis of genetic diversity and population structure in upland cotton (Gossypium hirsutum L.) germplasm using simple sequence repeats

M Seyoum, XM Du, SP He, YH Jia, Z Pan, JL Sun - Journal of genetics, 2018 - Springer
Improvement of cotton fibre yield and quality is challenging due to the narrow genetic base
of modern cotton cultivars, which emphasizes the great need to effectively explore the …

Population structure and genetic basis of the agronomic traits of upland cotton in China revealed by a genome‐wide association study using high‐density SNP s

C Huang, X Nie, C Shen, C You, W Li… - Plant Biotechnology …, 2017 - Wiley Online Library
Gossypium hirsutum L. represents the largest source of textile fibre, and China is one of the
largest cotton‐producing and cotton‐consuming countries in the world. To investigate the …

[HTML][HTML] Sampling nucleotide diversity in cotton

A Van Deynze, K Stoffel, M Lee, TA Wilkins, A Kozik… - BMC plant biology, 2009 - Springer
Background Cultivated cotton is an annual fiber crop derived mainly from two perennial
species, Gossypium hirsutum L. or upland cotton, and G. barbadense L., extra long-staple …