JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles

I Rauluseviciute, R Riudavets-Puig… - Nucleic Acids …, 2024 - academic.oup.com
Abstract JASPAR (https://jaspar. elixir. no/) is a widely-used open-access database
presenting manually curated high-quality and non-redundant DNA-binding profiles for …

JASPAR 2022: the 9th release of the open-access database of transcription factor binding profiles

JA Castro-Mondragon, R Riudavets-Puig… - Nucleic acids …, 2022 - academic.oup.com
Abstract JASPAR (http://jaspar. genereg. net/) is an open-access database containing
manually curated, non-redundant transcription factor (TF) binding profiles for TFs across six …

JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles

A Mathelier, O Fornes, DJ Arenillas, C Chen… - Nucleic acids …, 2016 - academic.oup.com
Abstract JASPAR (http://jaspar. genereg. net) is an open-access database storing curated,
non-redundant transcription factor (TF) binding profiles representing transcription factor …

JASPAR 2020: update of the open-access database of transcription factor binding profiles

O Fornes, JA Castro-Mondragon, A Khan… - Nucleic acids …, 2020 - academic.oup.com
Abstract JASPAR (http://jaspar. genereg. net) is an open-access database of curated, non-
redundant transcription factor (TF)-binding profiles stored as position frequency matrices …

A new generation of JASPAR, the open-access repository for transcription factor binding site profiles

D Vlieghe, A Sandelin, PJ De Bleser… - Nucleic acids …, 2006 - academic.oup.com
JASPAR is the most complete open-access collection of transcription factor binding site
(TFBS) matrices. In this new release, JASPAR grows into a meta-database of collections of …

JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework

A Khan, O Fornes, A Stigliani, M Gheorghe… - Nucleic acids …, 2018 - academic.oup.com
Abstract JASPAR (http://jaspar. genereg. net) is an open-access database of curated, non-
redundant transcription factor (TF)-binding profiles stored as position frequency matrices …

JASPAR 2010: the greatly expanded open-access database of transcription factor binding profiles

E Portales-Casamar, S Thongjuea… - Nucleic acids …, 2010 - academic.oup.com
ABSTRACT JASPAR (http://jaspar. genereg. net) is the leading open-access database of
matrix profiles describing the DNA-binding patterns of transcription factors (TFs) and other …

JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles

A Mathelier, X Zhao, AW Zhang, F Parcy… - Nucleic acids …, 2014 - academic.oup.com
Abstract JASPAR (http://jaspar. genereg. net) is the largest open-access database of matrix-
based nucleotide profiles describing the binding preference of transcription factors from …

PlantTFDB 4.0: toward a central hub for transcription factors and regulatory interactions in plants

J Jin, F Tian, DC Yang, YQ Meng, L Kong… - Nucleic acids …, 2016 - academic.oup.com
With the goal of providing a comprehensive, high-quality resource for both plant transcription
factors (TFs) and their regulatory interactions with target genes, we upgraded plant TF …

TFBSTools: an R/bioconductor package for transcription factor binding site analysis

G Tan, B Lenhard - Bioinformatics, 2016 - academic.oup.com
The ability to efficiently investigate transcription factor binding sites (TFBSs) genome-wide is
central to computational studies of gene regulation. TFBSTools is an R/Bioconductor …