[HTML][HTML] Phylotyping and functional analysis of two ancient human microbiomes
Background The Human Microbiome Project (HMP) is one of the US National Institutes of
Health Roadmap for Medical Research. Primary interests of the HMP include the …
Health Roadmap for Medical Research. Primary interests of the HMP include the …
[HTML][HTML] Insights from characterizing extinct human gut microbiomes
In an effort to better understand the ancestral state of the human distal gut microbiome, we
examine feces retrieved from archaeological contexts (coprolites). To accomplish this, we …
examine feces retrieved from archaeological contexts (coprolites). To accomplish this, we …
[HTML][HTML] Reconstruction of ancient microbial genomes from the human gut
Loss of gut microbial diversity,,,,–in industrial populations is associated with chronic
diseases, underscoring the importance of studying our ancestral gut microbiome. However …
diseases, underscoring the importance of studying our ancestral gut microbiome. However …
Comparison of extraction methods for recovering ancient microbial DNA from paleofeces
Objectives Paleofeces are valuable to archeologists and evolutionary biologists for their
potential to yield health, dietary, and host information. As a rich source of preserved …
potential to yield health, dietary, and host information. As a rich source of preserved …
[HTML][HTML] Insights into human evolution from ancient and contemporary microbiome studies
Over the past decade, human microbiome research has energized the study of human
evolution through a complete shift in our understanding of what it means to be human. The …
evolution through a complete shift in our understanding of what it means to be human. The …
[HTML][HTML] Paleomicrobiology: revealing fecal microbiomes of ancient indigenous cultures
RJ Cano, J Rivera-Perez, GA Toranzos… - PloS one, 2014 - journals.plos.org
Coprolites are fossilized feces that can be used to provide information on the composition of
the intestinal microbiota and, as we show, possibly on diet. We analyzed human coprolites …
the intestinal microbiota and, as we show, possibly on diet. We analyzed human coprolites …
[HTML][HTML] Microbial eukaryotes in the human microbiome: ecology, evolution, and future directions
High throughput sequencing technology has opened a window into the vast communities of
bacteria that live on and in humans, demonstrating tremendous variability, and that they play …
bacteria that live on and in humans, demonstrating tremendous variability, and that they play …
[HTML][HTML] Components of a Neanderthal gut microbiome recovered from fecal sediments from El Salt
A comprehensive view of our evolutionary history cannot ignore the ancestral features of our
gut microbiota. To provide some glimpse into the past, we searched for human gut …
gut microbiota. To provide some glimpse into the past, we searched for human gut …
Towards standards for human fecal sample processing in metagenomic studies
Technical variation in metagenomic analysis must be minimized to confidently assess the
contributions of microbiota to human health. Here we tested 21 representative DNA …
contributions of microbiota to human health. Here we tested 21 representative DNA …
[HTML][HTML] Novel bacterial taxa in the human microbiome
KM Wylie, RM Truty, TJ Sharpton… - PloS one, 2012 - journals.plos.org
The human gut harbors thousands of bacterial taxa. A profusion of metagenomic sequence
data has been generated from human stool samples in the last few years, raising the …
data has been generated from human stool samples in the last few years, raising the …