[HTML][HTML] CTtrack: a CNN+ Transformer-based framework for fiber orientation estimation & tractography

SMH Hosseini, M Hassanpour, S Masoudnia… - Neuroscience …, 2022 - Elsevier
In recent years, multiple data-driven fiber orientation distribution function (fODF) estimation
algorithms and automatic tractography pipelines have been proposed to address the …

[HTML][HTML] Learning to estimate the fiber orientation distribution function from diffusion-weighted MRI

D Karimi, L Vasung, C Jaimes, F Machado-Rivas… - NeuroImage, 2021 - Elsevier
Estimation of white matter fiber orientation distribution function (fODF) is the essential first
step for reliable brain tractography and connectivity analysis. Most of the existing fODF …

Diffusion MRI fiber orientation distribution function estimation using voxel-wise spherical U-net

S Sedlar, T Papadopoulo, R Deriche… - … MICCAI Workshop, Lima …, 2021 - Springer
Abstract Diffusion Magnetic Resonance Imaging (dMRI) is an imaging technique which
enables analysis of the brain tissue at a microscopic scale, particularly the analysis of white …

[HTML][HTML] Enhancing the estimation of fiber orientation distributions using convolutional neural networks

O Lucena, SB Vos, V Vakharia, J Duncan… - Computers in Biology …, 2021 - Elsevier
Local fiber orientation distributions (FODs) can be computed from diffusion magnetic
resonance imaging (dMRI). The accuracy and ability of FODs to resolve complex fiber …

Recovering high‐quality fiber orientation distributions from a reduced number of diffusion‐weighted images using a model‐driven deep learning architecture

JJ Bartlett, CE Davey, LA Johnston… - Magnetic Resonance in …, 2024 - Wiley Online Library
Purpose The aim of this study was to develop a model‐based deep learning architecture to
accurately reconstruct fiber orientation distributions (FODs) from a reduced number of …

A Unified Learning Model for Estimating Fiber Orientation Distribution Functions on Heterogeneous Multi-shell Diffusion-Weighted MRI

T Yao, N Newlin, P Kanakaraj, V Nath, LY Cai… - International Workshop …, 2023 - Springer
Diffusion-weighted (DW) MRI measures the direction and scale of the local diffusion process
in every voxel through its spectrum in q-space, typically acquired in one or more shells …

Deeptract: A probabilistic deep learning framework for white matter fiber tractography

I Benou, T Riklin Raviv - … Conference, Shenzhen, China, October 13–17 …, 2019 - Springer
We present DeepTract, a deep-learning framework for estimating white matter fibers
orientation and streamline tractography. We adopt a data-driven approach for fiber …

Asymmetric fiber trajectory distribution estimation using streamline differential equation

Y Feng, J He - Medical image analysis, 2020 - Elsevier
Fiber orientation distribution estimation with diffusion magnetic resonance imaging (dMRI) is
critical in white matter fiber tractography which is most commonly based on symmetric …

Fingerprinting Orientation Distribution Functions in diffusion MRI detects smaller crossing angles

SH Baete, MA Cloos, YC Lin, DG Placantonakis… - Neuroimage, 2019 - Elsevier
Diffusion tractography is routinely used to study white matter architecture and brain
connectivity in vivo. A key step for successful tractography of neuronal tracts is the correct …

Fast learning of fiber orientation distribution function for MR tractography using convolutional neural network

Z Lin, T Gong, K Wang, Z Li, H He, Q Tong… - Medical …, 2019 - Wiley Online Library
Purpose In diffusion‐weighted magnetic resonance imaging (DW‐MRI), the fiber orientation
distribution function (fODF) is of great importance for solving complex fiber configurations to …