The Development And Application Of Machine Learning For Drug Discovery And Drug Response Prediction For Personalized Cancer Treatment

D Stover - 2024 - conservancy.umn.edu
In the field of pharmacogenomics and precision medicine, gene expression analysis has
become a crucial tool in predicting patient drug response. My contributions to this field come …

Deep transfer learning of cancer drug responses by integrating bulk and single-cell RNA-seq data

J Chen, X Wang, A Ma, QE Wang, B Liu, L Li… - Nature …, 2022 - nature.com
Drug screening data from massive bulk gene expression databases can be analyzed to
determine the optimal clinical application of cancer drugs. The growing amount of single-cell …

Anti-cancer drug sensitivity predictive modeling for improvement of precision medicine using machine learning algorithms

R Rahman - 2019 - ttu-ir.tdl.org
Precision medicine entails the design of therapies that are matched for each individual
patient. Thus, predictive modeling of anti-cancer drug responses for specific patients …

Learning and actioning general principles of cancer cell drug sensitivity

F Carli, P Di Chiaro, M Morelli, C Arora, L Bisceglia… - 2024 - europepmc.org
High-throughput screening platforms for the profiling of drug sensitivity of hundreds of
cancer cell lines (CCLs) have generated large datasets that hold the potential to unlock …

Machine learning and data mining frameworks for predicting drug response in cancer: An overview and a novel in silico screening process based on association rule …

K Vougas, T Sakellaropoulos, A Kotsinas… - Pharmacology & …, 2019 - Elsevier
A major challenge in cancer treatment is predicting the clinical response to anti-cancer
drugs on a personalized basis. The success of such a task largely depends on the ability to …

A survey and systematic assessment of computational methods for drug response prediction

J Chen, L Zhang - Briefings in bioinformatics, 2021 - academic.oup.com
Drug response prediction arises from both basic and clinical research of personalized
therapy, as well as drug discovery for cancers. With gene expression profiles and other …

[PDF][PDF] Gene expression based inference of drug resistance in cancer

CC Hollier, D Sengupta - academia.edu
Inter and intra-tumoral heterogeneity are major stumbling blocks in the treatment of cancer
and are responsible for imparting differential drug responses in cancer patients. Recently …

Computational models for predicting drug responses in cancer research

F Azuaje - Briefings in bioinformatics, 2017 - academic.oup.com
The computational prediction of drug responses based on the analysis of multiple types of
genome-wide molecular data is vital for accomplishing the promise of precision medicine in …

Enabling Single‐Cell Drug Response Annotations from Bulk RNA‐Seq Using SCAD

Z Zheng, J Chen, X Chen, L Huang, W Xie… - Advanced …, 2023 - Wiley Online Library
The single‐cell RNA sequencing (scRNA‐seq) quantifies the gene expression of individual
cells, while the bulk RNA sequencing (bulk RNA‐seq) characterizes the mixed transcriptome …

[HTML][HTML] Machine learning in the prediction of cancer therapy

R Rafique, SMR Islam, JU Kazi - Computational and Structural …, 2021 - Elsevier
Resistance to therapy remains a major cause of cancer treatment failures, resulting in many
cancer-related deaths. Resistance can occur at any time during the treatment, even at the …