The microbial contribution to macroecology
There has been a recent explosion of research within the field of microbial ecology that has
been fueled, in part, by methodological improvements that make it feasible to characterize …
been fueled, in part, by methodological improvements that make it feasible to characterize …
The interplay between abiotic and biotic factors in dispersal decisions in metacommunities
Suitable conditions for species to survive and reproduce constitute their ecological niche,
which is built by abiotic conditions and interactions with conspecifics and heterospecifics …
which is built by abiotic conditions and interactions with conspecifics and heterospecifics …
Microbiomes as metacommunities: understanding host-associated microbes through metacommunity ecology
Interest in host-associated microbiomes has skyrocketed recently, yet our ability to explain
microbiome variation has remained stubbornly low. Considering scales of interaction …
microbiome variation has remained stubbornly low. Considering scales of interaction …
Phylogenetic clustering and overdispersion in bacterial communities
MC Horner-Devine, BJM Bohannan - Ecology, 2006 - Wiley Online Library
Very little is known about the structure of microbial communities, despite their abundance
and importance to ecosystem processes. Recent work suggests that bacterial biodiversity …
and importance to ecosystem processes. Recent work suggests that bacterial biodiversity …
Beyond biogeographic patterns: processes shaping the microbial landscape
CA Hanson, JA Fuhrman, MC Horner-Devine… - Nature Reviews …, 2012 - nature.com
Recently, microbiologists have established the existence of biogeographic patterns among a
wide range of microorganisms. The focus of the field is now shifting to identifying the …
wide range of microorganisms. The focus of the field is now shifting to identifying the …
Evolution of dispersal in explicitly spatial metacommunities
We apply an evolutionary game theoretic approach to the evolution of dispersal in explicitly
spatial metacommunities, using a flexible parametric class of dispersal kernels, namely 2Dt …
spatial metacommunities, using a flexible parametric class of dispersal kernels, namely 2Dt …
What microbial population genomics has taught us about speciation
BJ Shapiro - Population genomics: microorganisms, 2019 - Springer
Population genomics has emerged as a valuable tool to define and delimit species and to
understand the mechanisms that drive and maintain speciation. Species and speciation …
understand the mechanisms that drive and maintain speciation. Species and speciation …
Horizontal gene transfer and the evolution of bacterial and archaeal population structure
Many bacterial and archaeal lineages have a history of extensive and ongoing horizontal
gene transfer and loss, as evidenced by the large differences in genome content even …
gene transfer and loss, as evidenced by the large differences in genome content even …
Life between patches: incorporating microbiome biology alters the predictions of metacommunity models
ET Miller, BJM Bohannan - Frontiers in Ecology and Evolution, 2019 - frontiersin.org
Although most models conceptualize a metacommunity as a collection of habitat patches
embedded in a matrix that is not hospitable to life, new applications of metacommunity …
embedded in a matrix that is not hospitable to life, new applications of metacommunity …
Diversity within species: interpreting strains in microbiomes
Studying within-species variation has traditionally been limited to culturable bacterial
isolates and low-resolution microbial community fingerprinting. Metagenomic sequencing …
isolates and low-resolution microbial community fingerprinting. Metagenomic sequencing …