A functional perspective on phenotypic heterogeneity in microorganisms

M Ackermann - Nature Reviews Microbiology, 2015 - nature.com
Most microbial communities consist of a genetically diverse assembly of different organisms,
and the level of genetic diversity plays an important part in community properties and …

Can the microbiome influence host evolutionary trajectories?

LP Henry, M Bruijning, SKG Forsberg, JF Ayroles - Biorxiv, 2019 - biorxiv.org
The microbiome shapes many traits in hosts, but we still do not understand how it influences
host evolution. To impact host evolution, the microbiome must be heritable and have …

[HTML][HTML] Ecological speciation in bacteria: reverse ecology approaches reveal the adaptive part of bacterial cladogenesis

F Lassalle, D Muller, X Nesme - Research in microbiology, 2015 - Elsevier
In this review, we synthesise current models and recent comparative genomic studies
describing how bacterial species may emerge through adaptation to a new ecological niche …

Macroecology of unicellular organisms–patterns and processes

J Soininen - Environmental microbiology reports, 2012 - Wiley Online Library
Macroecology examines the relationship between organisms and their environment at large
spatial (and temporal) scales. Typically, macroecologists explain the large‐scale patterns of …

Quantifying the roles of immigration and chance in shaping prokaryote community structure

WT Sloan, M Lunn, S Woodcock… - Environmental …, 2006 - Wiley Online Library
Naturally occurring populations of bacteria and archaea are vital to life on the earth and are
of enormous practical significance in medicine, engineering and agriculture. However, the …

The evolution of the competition–dispersal trade-off affects α-and β-diversity in a heterogeneous metacommunity

F Laroche, P Jarne, T Perrot… - Proceedings of the …, 2016 - royalsocietypublishing.org
Difference in dispersal ability is a key driver of species coexistence in metacommunities.
However, the available frameworks for interpreting species diversity patterns in natura often …

Effects of dispersal and selection on stochastic assembly in microbial communities

S Evans, JBH Martiny, SD Allison - The ISME journal, 2017 - academic.oup.com
Stochastic processes can play an important role in microbial community assembly. Dispersal
limitation is one process that can increase stochasticity and obscure relationships between …

Metagenomic analysis of ecological niche overlap and community collapse in microbiome dynamics

H Fujita, M Ushio, K Suzuki, MS Abe… - Frontiers in …, 2023 - frontiersin.org
Species utilizing the same resources often fail to coexist for extended periods of time. Such
competitive exclusion mechanisms potentially underly microbiome dynamics, causing …

The rates of global bacterial and archaeal dispersal

S Louca - The ISME Journal, 2022 - academic.oup.com
The phylogenetic resolution at which microorganisms display geographic endemism, the
rates at which they disperse at global scales, and the role of humans on global microbial …

Contrasting the relative importance of species sorting and dispersal limitation in shaping marine bacterial versus protist communities

W Wu, HP Lu, A Sastri, YC Yeh, GC Gong… - The ISME …, 2018 - academic.oup.com
A central challenge in microbial ecology is to understand the underlying mechanisms driving
community assembly, particularly in the continuum of species sorting and dispersal …