Exploiting syntactic and semantics information for chemical–disease relation extraction

H Zhou, H Deng, L Chen, Y Yang, C Jia, D Huang - Database, 2016 - academic.oup.com
Identifying chemical–disease relations (CDR) from biomedical literature could improve
chemical safety and toxicity studies. This article proposes a novel syntactic and semantic …

CD-REST: a system for extracting chemical-induced disease relation in literature

J Xu, Y Wu, Y Zhang, J Wang, HJ Lee, H Xu - Database, 2016 - academic.oup.com
Mining chemical-induced disease relations embedded in the vast biomedical literature could
facilitate a wide range of computational biomedical applications, such as …

Chemical-induced disease relation extraction via convolutional neural network

J Gu, F Sun, L Qian, G Zhou - Database, 2017 - academic.oup.com
This article describes our work on the BioCreative-V chemical–disease relation (CDR)
extraction task, which employed a maximum entropy (ME) model and a convolutional neural …

Assessing the state of the art in biomedical relation extraction: overview of the BioCreative V chemical-disease relation (CDR) task

CH Wei, Y Peng, R Leaman, AP Davis, CJ Mattingly… - Database, 2016 - academic.oup.com
Manually curating chemicals, diseases and their relationships is significantly important to
biomedical research, but it is plagued by its high cost and the rapid growth of the biomedical …

Knowledge-guided convolutional networks for chemical-disease relation extraction

H Zhou, C Lang, Z Liu, S Ning, Y Lin, L Du - BMC bioinformatics, 2019 - Springer
Background Automatic extraction of chemical-disease relations (CDR) from unstructured text
is of essential importance for disease treatment and drug development. Meanwhile …

Chemical-induced disease relation extraction with various linguistic features

J Gu, L Qian, G Zhou - Database, 2016 - academic.oup.com
Understanding the relations between chemicals and diseases is crucial in various
biomedical tasks such as new drug discoveries and new therapy developments. While …

Chemical-induced disease relation extraction via attention-based distant supervision

J Gu, F Sun, L Qian, G Zhou - BMC bioinformatics, 2019 - Springer
Background Automatically understanding chemical-disease relations (CDRs) is crucial in
various areas of biomedical research and health care. Supervised machine learning …

[HTML][HTML] An effective neural model extracting document level chemical-induced disease relations from biomedical literature

W Zheng, H Lin, Z Li, X Liu, Z Li, B Xu, Y Zhang… - Journal of biomedical …, 2018 - Elsevier
Since identifying relations between chemicals and diseases (CDR) are important for
biomedical research and healthcare, the challenge proposed by BioCreative V requires …

[PDF][PDF] UTH-CCB@ BioCreative V CDR task: identifying chemical-induced disease relations in biomedical text

J Xu, Y Wu, Y Zhang, J Wang, R Liu… - Proceedings of the fifth …, 2015 - clamp.uth.edu
This paper describes the system developed by the UTH-CCB team from the University of
Texas Health Science Center at Houston (UTHealth), for the 2015 BioCreative V shared …

[HTML][HTML] BioCreative V CDR task corpus: a resource for chemical disease relation extraction

J Li, Y Sun, RJ Johnson, D Sciaky, CH Wei… - Database, 2016 - academic.oup.com
Community-run, formal evaluations and manually annotated text corpora are critically
important for advancing biomedical text-mining research. Recently in BioCreative V, a new …