Computer simulation of polypeptide adsorption on model biomaterials

F Ganazzoli, G Raffaini - Physical chemistry chemical physics, 2005 - pubs.rsc.org
When biomaterials are inserted in a biological environment, for instance in a body implant,
proteins do quickly adsorb on the exposed surface. Such process is of fundamental …

Protein adsorption on biomaterial and nanomaterial surfaces: a molecular modeling approach to study non-covalent interactions

G Raffaini, F Ganazzoli - Journal of Applied Biomaterials and …, 2010 - journals.sagepub.com
Atomistic computer simulations of protein adsorption on the heterogeneous surface of
biomaterials and nanomaterials are reviewed. First, we present a very brief introduction to …

Sequential adsorption of proteins and the surface modification of biomaterials: A molecular dynamics study

G Raffaini, F Ganazzoli - Journal of Materials Science: Materials in …, 2007 - Springer
The sequential adsorption of two proteins of the same or of an unlike nature on a
heterogeneous hydrophobic surface is investigated through atomistic molecular dynamics …

Enhancing protein adsorption simulations by using accelerated molecular dynamics

C Mücksch, HM Urbassek - PLoS One, 2013 - journals.plos.org
The atomistic modeling of protein adsorption on surfaces is hampered by the different time
scales of the simulation (s) and experiment (up to hours), and the accordingly different …

Protein adsorption on the hydrophilic surface of a glassy polymer: a computer simulation study

G Raffaini, F Ganazzoli - Physical chemistry chemical physics, 2006 - pubs.rsc.org
Using atomistic computer simulations, we study the adsorption of different globular protein
fragments with different secondary structures on the surface of a hydrophilic glassy polymer …

Quantitative modeling of protein adsorption

CM Roth, AM Lenhoff - Biopolymers at Interfaces, 2003 - api.taylorfrancis.com
The general principles that have been deduced from experimental observations of protein
adsorption are covered in several major review articles [1–3]. Our focus here is more …

A multiscale model of protein adsorption on a nanoparticle surface

D Power, I Rouse, S Poggio, E Brandt… - … and Simulation in …, 2019 - iopscience.iop.org
We present a methodology to quantify the essential interactions at the interface between
inorganic solid nanoparticles (NPs) and biological molecules. Our model is based on pre …

A theoretical analysis of the thermodynamic contributions for the adsorption of individual protein residues on functionalized surfaces

RA Latour Jr, LL Hench - Biomaterials, 2002 - Elsevier
Although the denaturing of adsorbed proteins on biomaterials surfaces is believed to lead to
adverse tissue reactions to implanted materials, very little is currently known of the actual …

Molecular dynamics simulation of protein adsorption at fluid interfaces: a comparison of all-atom and coarse-grained models

SR Euston - Biomacromolecules, 2010 - ACS Publications
The adsorption of LTP at the decane− water interface was modeled using all-atom and
coarse-grained (CG) molecular dynamics simulations. The CG model (300 ns simulation …

Modeling and simulation of protein–surface interactions: achievements and challenges

M Ozboyaci, DB Kokh, S Corni… - Quarterly reviews of …, 2016 - cambridge.org
Understanding protein–inorganic surface interactions is central to the rational design of new
tools in biomaterial sciences, nanobiotechnology and nanomedicine. Although a significant …