Novel genes dramatically alter regulatory network topology in amphioxus

Q Zhang, CM Zmasek, LJ Dishaw, MG Mueller, Y Ye… - Genome biology, 2008 - Springer
Background Regulation in protein networks often utilizes specialized domains
that'join'(or'connect') the network through specific protein-protein interactions. The innate …

The amphioxus genome provides unique insight into the evolution of immunity

LJ Dishaw, RN Haire, GW Litman - Briefings in functional …, 2012 - academic.oup.com
Immune systems evolve as essential strategies to maintain homeostasis with the
environment, prevent microbial assault and recycle damaged host tissues. The immune …

Genomic analysis of the immune gene repertoire of amphioxus reveals extraordinary innate complexity and diversity

S Huang, S Yuan, L Guo, Y Yu, J Li, T Wu, T Liu… - Genome …, 2008 - genome.cshlp.org
It has been speculated that before vertebrates evolved somatic diversity-based adaptive
immunity, the germline-encoded diversity of innate immunity may have been more …

Genes “waiting” for recruitment by the adaptive immune system: the insights from amphioxus

C Yu, M Dong, X Wu, S Li, S Huang, J Su… - The Journal of …, 2005 - journals.aai.org
In seeking evidence of the existence of adaptive immune system (AIS) in ancient chordate,
cDNA clones of six libraries from a protochordate, the Chinese amphioxus, were sequenced …

Amphioxus functional genomics and the origins of vertebrate gene regulation

F Marlétaz, PN Firbas, I Maeso, JJ Tena, O Bogdanovic… - Nature, 2018 - nature.com
Vertebrates have greatly elaborated the basic chordate body plan and evolved highly
distinctive genomes that have been sculpted by two whole-genome duplications. Here we …

[图书][B] Amphioxus immunity: tracing the origins of human immunity

AL Xu - 2015 - books.google.com
Amphioxus Immunity: Tracing the Origin of Human Immunity covers a remarkable range of
information about Amphioxus and its evolutionary context. This compilation of what is …

The evolution and regulation of the mucosal immune complexity in the basal chordate amphioxus

S Huang, X Wang, Q Yan, L Guo, S Yuan… - The Journal of …, 2011 - journals.aai.org
Both amphioxus and the sea urchin encode a complex innate immune gene repertoire in
their genomes, but the composition and mechanisms of their innate immune systems, as …

Interacting gene clusters and the evolution of the vertebrate immune system

T Makino, A McLysaght - Molecular biology and evolution, 2008 - academic.oup.com
Unraveling the “code” of genome structure is an important goal of genomics research.
Colocalization of genes in eukaryotic genomes may facilitate preservation of favorable allele …

The origins of the adaptive immune system: whatever next?

J Kaufman - Nature immunology, 2002 - nature.com
The origins of the adaptive immune system: whatever next? | Nature Immunology Skip to main
content Thank you for visiting nature.com. You are using a browser version with limited support …

Selective landscapes in newt immune genes inferred from patterns of nucleotide variation

A Fijarczyk, K Dudek, W Babik - Genome Biology and Evolution, 2016 - academic.oup.com
Host–pathogen interactions may result in either directional selection or in pressure for the
maintenance of polymorphism at the molecular level. Hence signatures of both positive and …