Structure of linkage disequilibrium and phenotypic associations in the maize genome
DL Remington, JM Thornsberry… - Proceedings of the …, 2001 - National Acad Sciences
Association studies based on linkage disequilibrium (LD) can provide high resolution for
identifying genes that may contribute to phenotypic variation. We report patterns of local and …
identifying genes that may contribute to phenotypic variation. We report patterns of local and …
SNP frequency, haplotype structure and linkage disequilibrium in elite maize inbred lines
ADA Ching, KS Caldwell, M Jung, M Dolan… - BMC genetics, 2002 - Springer
Background Recent studies of ancestral maize populations indicate that linkage
disequilibrium tends to dissipate rapidly, sometimes within 100 bp. We set out to examine …
disequilibrium tends to dissipate rapidly, sometimes within 100 bp. We set out to examine …
Patterns of DNA sequence polymorphism along chromosome 1 of maize (Zea mays ssp. mays L.)
MI Tenaillon, MC Sawkins, AD Long… - Proceedings of the …, 2001 - National Acad Sciences
We measured sequence diversity in 21 loci distributed along chromosome 1 of maize (Zea
mays ssp. mays L.). For each locus, we sequenced a common sample of 25 individuals …
mays ssp. mays L.). For each locus, we sequenced a common sample of 25 individuals …
Comprehensive genotyping of the USA national maize inbred seed bank
MC Romay, MJ Millard, JC Glaubitz, JA Peiffer… - Genome biology, 2013 - Springer
Background Genotyping by sequencing, a new low-cost, high-throughput sequencing
technology was used to genotype 2,815 maize inbred accessions, preserved mostly at the …
technology was used to genotype 2,815 maize inbred accessions, preserved mostly at the …
Genetic properties of the maize nested association mapping population
MD McMullen, S Kresovich, HS Villeda, P Bradbury… - Science, 2009 - science.org
Maize genetic diversity has been used to understand the molecular basis of phenotypic
variation and to improve agricultural efficiency and sustainability. We crossed 25 diverse …
variation and to improve agricultural efficiency and sustainability. We crossed 25 diverse …
Maize association population: a high‐resolution platform for quantitative trait locus dissection
Crop improvement and the dissection of complex genetic traits require germplasm diversity.
Although this necessary phenotypic variability exists in diverse maize, most research is …
Although this necessary phenotypic variability exists in diverse maize, most research is …
Linkage disequilibrium in European elite maize germplasm investigated with SSRs
Abstract Information about the extent and genomic distribution of linkage disequilibrium (LD)
is of fundamental importance for association mapping. The main objectives of this study …
is of fundamental importance for association mapping. The main objectives of this study …
The relationship between parental genetic or phenotypic divergence and progeny variation in the maize nested association mapping population
HY Hung, C Browne, K Guill, N Coles, M Eller, A Garcia… - Heredity, 2012 - nature.com
Appropriate selection of parents for the development of mapping populations is pivotal to
maximizing the power of quantitative trait loci detection. Trait genotypic variation within a …
maximizing the power of quantitative trait loci detection. Trait genotypic variation within a …
Association Mapping for Enhancing Maize (Zea mays L.) Genetic Improvement
Association mapping through linkage disequilibrium (LD) analysis is a powerful tool for the
dissection of complex agronomic traits and for the identification of alleles that can contribute …
dissection of complex agronomic traits and for the identification of alleles that can contribute …
Highly variable patterns of linkage disequilibrium in multiple soybean populations
Prospects for utilizing whole-genome association analysis in autogamous plant populations
appear promising due to the reported high levels of linkage disequilibrium (LD). To …
appear promising due to the reported high levels of linkage disequilibrium (LD). To …