Functional genomics, transcriptomics, and proteomics reveal distinct combat strategies between lineages of wood-degrading fungi with redundant wood decay …

GN Presley, J Zhang, SO Purvine… - Frontiers in …, 2020 - frontiersin.org
Wood-degrading fungi vary in their strategies for deconstructing wood, and their competitive
successes shape the rate and fate of carbon released from wood, Earth's largest pool of …

Evidence for Lignocellulose-Decomposing Enzymes in the Genome and Transcriptome of the Aquatic Hyphomycete Clavariopsis aquatica

F Heeger, EC Bourne, C Wurzbacher, E Funke… - Journal of Fungi, 2021 - mdpi.com
Fungi are ecologically outstanding decomposers of lignocellulose. Fungal lignocellulose
degradation is prominent in saprotrophic Ascomycota and Basidiomycota of the subkingdom …

Genomes and secretomes of Ascomycota fungi reveal diverse functions in plant biomass decomposition and pathogenesis

JF Challacombe, CN Hesse, LM Bramer, LA McCue… - BMC genomics, 2019 - Springer
Background The dominant fungi in arid grasslands and shrublands are members of the
Ascomycota phylum. Ascomycota fungi are important drivers in carbon and nitrogen cycling …

Quantitative comparison of the biomass-degrading enzyme repertoires of five filamentous fungi

MØ Arntzen, O Bengtsson, A Várnai, F Delogu… - Scientific Reports, 2020 - nature.com
The efficiency of microorganisms to degrade lignified plants is of great importance in the
Earth's carbon cycle, but also in industrial biorefinery processes, such as for biofuel …

The White-Rot Basidiomycete Dichomitus squalens Shows Highly Specific Transcriptional Response to Lignocellulose-Related Aromatic Compounds

JE Kowalczyk, M Peng, M Pawlowski… - … in bioengineering and …, 2019 - frontiersin.org
Lignocellulosic plant biomass is an important feedstock for bio-based economy. In particular,
it is an abundant renewable source of aromatic compounds, which are present as part of …

Distinct growth and secretome strategies for two taxonomically divergent brown rot fungi

GN Presley, JS Schilling - Applied and Environmental …, 2017 - Am Soc Microbiol
Brown rot fungi are wood-degrading fungi that employ both oxidative and hydrolytic
mechanisms to degrade wood. Hydroxyl radicals that facilitate the oxidative component are …

Intracellular pathways for lignin catabolism in white-rot fungi

C Del Cerro, E Erickson, T Dong… - Proceedings of the …, 2021 - National Acad Sciences
Lignin is a biopolymer found in plant cell walls that accounts for 30% of the organic carbon
in the biosphere. White-rot fungi (WRF) are considered the most efficient organisms at …

Proteomic Characterization of Lignocellulolytic Enzymes Secreted by the Insect-Associated Fungus Daldinia decipiens oita, Isolated from a Forest in Northern Japan

C Hori, R Song, K Matsumoto… - Applied and …, 2020 - Am Soc Microbiol
Wood-devastating insects utilize their symbiotic microbes with lignocellulose-degrading
abilities to extract energy from recalcitrant woods. It is well known that free-living …

[HTML][HTML] Transcriptome and exoproteome analysis of utilization of plant-derived biomass by Myceliophthora thermophila

MA Kolbusz, M Di Falco, N Ishmael… - Fungal Genetics and …, 2014 - Elsevier
Myceliophthora thermophila is a thermophilic fungus whose genome encodes a wide range
of carbohydrate-active enzymes (CAZymes) involved in plant biomass degradation. Such …

Coupling secretomics with enzyme activities to compare the temporal processes of wood metabolism among white and brown rot fungi

GN Presley, E Panisko, SO Purvine… - Applied and …, 2018 - Am Soc Microbiol
Wood-degrading fungi use a sequence of oxidative and hydrolytic mechanisms to loosen
lignocellulose and then release and metabolize embedded sugars. These temporal …