Strategies for large-scale targeted metabolomics quantification by liquid chromatography-mass spectrometry

J Zhou, Y Yin - Analyst, 2016 - pubs.rsc.org
Advances in liquid chromatography-mass spectrometry (LC-MS) instruments and analytical
strategies have brought about great progress in targeted metabolomics analysis. This …

A large-scale analysis of targeted metabolomics data from heterogeneous biological samples provides insights into metabolite dynamics

HJ Lee, DM Kremer, P Sajjakulnukit, L Zhang… - Metabolomics, 2019 - Springer
Introduction We previously developed a tandem mass spectrometry-based label-free
targeted metabolomics analysis framework coupled to two distinct chromatographic …

Liquid chromatography-mass spectrometric multiple reaction monitoring-based strategies for expanding targeted profiling towards quantitative metabolomics

B Guo, B Chen, A Liu, W Zhu, S Yao - Current drug metabolism, 2012 - ingentaconnect.com
Recent advances in analytical methodologies have made it possible to bring metabolomic
profiling into quantitative metabolomics that permits precise measurements of …

Data processing for mass spectrometry-based metabolomics

M Katajamaa, M Orešič - Journal of chromatography A, 2007 - Elsevier
Modern analytical technologies afford comprehensive and quantitative investigation of a
multitude of different metabolites. Typical metabolomic experiments can therefore produce …

Eight key rules for successful data‐dependent acquisition in mass spectrometry‐based metabolomics

E Defossez, J Bourquin, S von Reuss… - Mass Spectrometry …, 2023 - Wiley Online Library
In recent years, metabolomics has emerged as a pivotal approach for the holistic analysis of
metabolites in biological systems. The rapid progress in analytical equipment, coupled to the …

MRMPROBS: a data assessment and metabolite identification tool for large-scale multiple reaction monitoring based widely targeted metabolomics

H Tsugawa, M Arita, M Kanazawa, A Ogiwara… - Analytical …, 2013 - ACS Publications
We developed a new software program, MRMPROBS, for widely targeted metabolomics by
using the large-scale multiple reaction monitoring (MRM) mode. The strategy became …

Analytical strategies for LC–MS-based targeted metabolomics

W Lu, BD Bennett, JD Rabinowitz - Journal of chromatography B, 2008 - Elsevier
Recent advances in mass spectrometry are enabling improved analysis of endogenous
metabolites. Here we discuss several issues relevant to developing liquid chromatography …

MetaboLyzer: a novel statistical workflow for analyzing postprocessed LC–MS metabolomics data

TD Mak, EC Laiakis, M Goudarzi… - Analytical …, 2014 - ACS Publications
Metabolomics, the global study of small molecules in a particular system, has in the past few
years risen to become a primary-omics platform for the study of metabolic processes. With …

Data acquisition workflows in liquid chromatography coupled to high resolution mass spectrometry-based metabolomics: Where do we stand?

F Fenaille, PB Saint-Hilaire, K Rousseau… - … of Chromatography a, 2017 - Elsevier
Typical mass spectrometry (MS) based untargeted metabolomics protocols are tedious as
well as time-and sample-consuming. In particular, they often rely on “full-scan-only” …

Large-scale targeted metabolomics method for metabolite profiling of human samples

G Cao, Z Song, Y Hong, Z Yang, Y Song, Z Chen… - Analytica Chimica …, 2020 - Elsevier
Targeted metabolomics has significant advantages for quantification but suffers from
reduced metabolite coverage. In this study, we developed a large-scale targeted …