dnaJ is a useful phylogenetic marker for alphaproteobacteria

A Alexandre, M Laranjo… - … of Systematic and …, 2008 - microbiologyresearch.org
In the past, bacterial phylogeny relied almost exclusively on 16S rRNA gene sequence
analysis. More recently, multilocus sequence analysis has been used to infer organismal …

History and current taxonomic status of genus Agrobacterium

JD Flores-Félix, E Menéndez, A Peix… - Systematic and applied …, 2020 - Elsevier
The genus Agrobacterium was created a century ago by Conn who included it in the family
Rhizobiaceae together with the genus Rhizobium. Initially, the genus Agrobacterium …

Updating prokaryotic taxonomy

R Rosselló-Mora - Journal of bacteriology, 2005 - Am Soc Microbiol
Prokaryotic taxonomy is cyclically confronted with breakthroughs of methodological and
conceptual innovations. The “sexiest” novelties are often met by periods of reluctance but …

Towards a genome-based taxonomy for prokaryotes

KT Konstantinidis, JM Tiedje - Journal of bacteriology, 2005 - Am Soc Microbiol
The ranks higher than the species in the prokaryotic taxonomy are primarily designated
based on phylogenetic analysis of the 16S rRNA gene sequences, but no definite standards …

A call to action for the International Committee on Systematics of Prokaryotes

IC Sutcliffe, ME Trujillo, WB Whitman… - Trends in microbiology, 2013 - cell.com
We have followed with great interest the letters to Trends in Microbiology from Gribaldo and
Brochier-Armanet [1] and Garrity and Oren [2] concerning the need to improve the framework …

Molecular approaches: advantages and artifacts in assessing bacterial diversity

DS Pontes, CI Lima-Bittencourt… - Journal of Industrial …, 2007 - academic.oup.com
Bacteria account for a major proportion of Earth's biological diversity. They play essential
roles in quite diverse environments and there has been an increasing interest in bacterial …

Proposal for changes in the International Code of Nomenclature of Prokaryotes: granting priority to Candidatus names

WB Whitman, IC Sutcliffe… - … Journal of Systematic …, 2019 - microbiologyresearch.org
Currently, the description of taxa designated Candidatus requires gene sequences and
other taxonomically relevant available information in the absence of an isolated pure culture …

Rhizobium

LD Kuykendall, JM Young… - Bergey's Manual of …, 2015 - Wiley Online Library
Rhi. zo'bi. um. Gr. n. rhiza a root; Gr. n. bios life; ML neut. n. Rhizobium that which lives in a
root. Proteobacteria/Alphaproteobacteria/Rhizobiales/Rhizobiaceae/Rhizobium Rods 0.5 …

A re-examination of the taxonomy of the genusRhizobium and related genera using numerical analysis

L Mannetje - Antonie van Leeuwenhoek, 1967 - Springer
Different methods of clustering were applied to the results of a numerical study of the
taxonomy of Rhizobium, Agrobacterium, Beijerinckia, Chromobacterium, and Bacillus …

The All-Species Living Tree project: a 16S rRNA-based phylogenetic tree of all sequenced type strains

P Yarza, M Richter, J Peplies, J Euzeby… - Systematic and applied …, 2008 - Elsevier
The signing authors together with the journal Systematic and Applied Microbiology (SAM)
have started an ambitious project that has been conceived to provide a useful tool especially …