[HTML][HTML] Chromatin signatures at transcriptional start sites separate two equally populated yet distinct classes of intergenic long noncoding RNAs

AC Marques, J Hughes, B Graham, MS Kowalczyk… - Genome biology, 2013 - Springer
Background Mammalian transcriptomes contain thousands of long noncoding RNAs
(lncRNAs). Some lncRNAs originate from intragenic enhancers which, when active, behave …

[HTML][HTML] Systematic analysis of genomic organization and structure of long non-coding RNAs in the human genome

J Sun, M Zhou, ZT Mao, DP Hao, Z Wang, CX Li - FEBS letters, 2013 - Elsevier
The genomic architecture of several functional elements in animals and plants, such as
microRNAs and tRNA, has been better characterized. As yet, there is very little known about …

[HTML][HTML] Transposable elements are major contributors to the origin, diversification, and regulation of vertebrate long noncoding RNAs

A Kapusta, Z Kronenberg, VJ Lynch, X Zhuo… - PLoS …, 2013 - journals.plos.org
Advances in vertebrate genomics have uncovered thousands of loci encoding long
noncoding RNAs (lncRNAs). While progress has been made in elucidating the regulatory …

Unique features of long non-coding RNA biogenesis and function

JJ Quinn, HY Chang - Nature reviews genetics, 2016 - nature.com
Long non-coding RNAs (lncRNAs) are a diverse class of RNAs that engage in numerous
biological processes across every branch of life. Although initially discovered as mRNA-like …

The functions and unique features of long intergenic non-coding RNA

JD Ransohoff, Y Wei, PA Khavari - Nature reviews Molecular cell …, 2018 - nature.com
Long intergenic non-coding RNA (lincRNA) genes have diverse features that distinguish
them from mRNA-encoding genes and exercise functions such as remodelling chromatin …

[HTML][HTML] Extensive localization of long noncoding RNAs to the cytosol and mono-and polyribosomal complexes

S van Heesch, M van Iterson, J Jacobi, S Boymans… - Genome biology, 2014 - Springer
Abstract Background Long noncoding RNAs (lncRNAs) form an abundant class of
transcripts, but the function of the majority of them remains elusive. While it has been shown …

Roles of long noncoding RNAs in chromosome domains

S Tomita, MOA Abdalla, S Fujiwara… - Wiley …, 2017 - Wiley Online Library
The cell nucleus is highly organized and functionally compartmentalized. Double‐stranded
naked DNA is complexed with core histones and assembled into nucleosomes and …

[HTML][HTML] Long non-coding RNAs: definitions, functions, challenges and recommendations

JS Mattick, PP Amaral, P Carninci… - … reviews Molecular cell …, 2023 - nature.com
Genes specifying long non-coding RNAs (lncRNAs) occupy a large fraction of the genomes
of complex organisms. The term 'lncRNAs' encompasses RNA polymerase I (Pol I), Pol II …

[HTML][HTML] lincRNAs: genomics, evolution, and mechanisms

I Ulitsky, DP Bartel - Cell, 2013 - cell.com
Long intervening noncoding RNAs (lincRNAs) are transcribed from thousands of loci in
mammalian genomes and might play widespread roles in gene regulation and other cellular …

Genome-wide analysis reveals distinct patterns of epigenetic features in long non-coding RNA loci

S Sati, S Ghosh, V Jain, V Scaria… - Nucleic acids …, 2012 - academic.oup.com
A major fraction of the transcriptome of higher organisms comprised an extensive repertoire
of long non-coding RNA (lncRNA) which express in a cell type and development stage …