[HTML][HTML] Genomic prediction models for traits differing in heritability for soybean, rice, and maize
Background Genomic selection is a powerful tool in plant breeding. By building a prediction
model using a training set with markers and phenotypes, genomic estimated breeding …
model using a training set with markers and phenotypes, genomic estimated breeding …
Omics-based hybrid prediction in maize
M Westhues, TA Schrag, C Heuer, G Thaller… - Theoretical and applied …, 2017 - Springer
Key message Complementing genomic data with other “omics” predictors can increase the
probability of success for predicting the best hybrid combinations using complex agronomic …
probability of success for predicting the best hybrid combinations using complex agronomic …
[HTML][HTML] Integrating crop growth models with whole genome prediction through approximate Bayesian computation
Genomic selection, enabled by whole genome prediction (WGP) methods, is revolutionizing
plant breeding. Existing WGP methods have been shown to deliver accurate predictions in …
plant breeding. Existing WGP methods have been shown to deliver accurate predictions in …
[HTML][HTML] Use of multiple traits genomic prediction, genotype by environment interactions and spatial effect to improve prediction accuracy in yield data
Genomic selection has been extensively implemented in plant breeding schemes. Genomic
selection incorporates dense genome-wide markers to predict the breeding values for …
selection incorporates dense genome-wide markers to predict the breeding values for …
[HTML][HTML] Within-and across-breed genomic prediction using whole-genome sequence and single nucleotide polymorphism panels
OOM Iheshiulor, JA Woolliams, X Yu… - Genetics Selection …, 2016 - Springer
Background Currently, genomic prediction in cattle is largely based on panels of about 54k
single nucleotide polymorphisms (SNPs). However with the decreasing costs of and current …
single nucleotide polymorphisms (SNPs). However with the decreasing costs of and current …
[HTML][HTML] Prediction of maize phenotypic traits with genomic and environmental predictors using gradient boosting frameworks
CC Westhues, GS Mahone, S da Silva… - Frontiers in plant …, 2021 - frontiersin.org
The development of crop varieties with stable performance in future environmental
conditions represents a critical challenge in the context of climate change. Environmental …
conditions represents a critical challenge in the context of climate change. Environmental …
[HTML][HTML] Genomic prediction of agronomic traits in wheat using different models and cross-validation designs
Key message Genomic predictions across environments and within populations resulted in
moderate to high accuracies but across-population genomic prediction should not be …
moderate to high accuracies but across-population genomic prediction should not be …
[HTML][HTML] Improving the accuracy of whole genome prediction for complex traits using the results of genome wide association studies
Z Zhang, U Ober, M Erbe, H Zhang, N Gao, J He, J Li… - PloS one, 2014 - journals.plos.org
Utilizing the whole genomic variation of complex traits to predict the yet-to-be observed
phenotypes or unobserved genetic values via whole genome prediction (WGP) and to infer …
phenotypes or unobserved genetic values via whole genome prediction (WGP) and to infer …
Evaluation of RR‐BLUP genomic selection models that incorporate peak genome‐wide association study signals in maize and sorghum
Certain agronomic crop traits are complex and thus governed by many small‐effect loci.
Statistical models typically used in a genome‐wide association study (GWAS) and genomic …
Statistical models typically used in a genome‐wide association study (GWAS) and genomic …
Usefulness of Multiparental Populations of Maize (Zea mays L.) for Genome-Based Prediction
The efficiency of marker-assisted prediction of phenotypes has been studied intensively for
different types of plant breeding populations. However, one remaining question is how to …
different types of plant breeding populations. However, one remaining question is how to …