Contrasting rates of molecular evolution and patterns of selection among gymnosperms and flowering plants

AR De La Torre, Z Li, Y Van de Peer… - … biology and evolution, 2017 - academic.oup.com
The majority of variation in rates of molecular evolution among seed plants remains both
unexplored and unexplained. Although some attention has been given to flowering plants …

Phylogeny, historical biogeography, and diversification of angiosperm order Ericales suggest ancient Neotropical and East Asian connections

JP Rose, TJ Kleist, SD Löfstrand, BT Drew… - Molecular Phylogenetics …, 2018 - Elsevier
Inferring interfamilial relationships within the eudicot order Ericales has remained one of the
more recalcitrant problems in angiosperm phylogenetics, likely due to a rapid, ancient …

The Compositae tree of life in the age of phylogenomics

JR Mandel, MS Barker, RJ Bayer… - … of Systematics and …, 2017 - Wiley Online Library
Comprising more than 25 000 species, the Sunflower Family (Compositae or Asteraceae) is
the largest family of flowering plants. Many of its lineages have experienced recent and …

A functional phylogenomic view of the seed plants

EK Lee, A Cibrian-Jaramillo, SO Kolokotronis… - PLoS …, 2011 - journals.plos.org
A novel result of the current research is the development and implementation of a unique
functional phylogenomic approach that explores the genomic origins of seed plant …

Origin and early evolution of angiosperms

DE Soltis, CD Bell, S Kim… - Annals of the New York …, 2008 - Wiley Online Library
Contributions from paleobotany, phylogenetics, genomics, developmental biology, and
developmental genetics have yielded tremendous insight into Darwin's “abominable …

Reconstructing the genome of the most recent common ancestor of flowering plants

F Murat, A Armero, C Pont, C Klopp, J Salse - Nature genetics, 2017 - nature.com
We describe here the reconstruction of the genome of the most recent common ancestor
(MRCA) of modern monocots and eudicots, accounting for 95% of extant angiosperms, with …

Phylotranscriptomics of Theaceae: generic-level relationships, reticulation and whole-genome duplication

Q Zhang, L Zhao, RA Folk, JL Zhao… - Annals of …, 2022 - academic.oup.com
Abstract Background and Aims Theaceae, with three tribes, nine genera and more than 200
species, are of great economic and ecological importance. Recent phylogenetic analyses …

Broadly sampled multigene analyses yield a well-resolved eukaryotic tree of life

LW Parfrey, J Grant, YI Tekle… - Systematic …, 2010 - academic.oup.com
An accurate reconstruction of the eukaryotic tree of life is essential to identify the innovations
underlying the diversity of microbial and macroscopic (eg, plants and animals) eukaryotes …

[HTML][HTML] Increased taxon sampling is advantageous for phylogenetic inference

DD Pollock, DJ Zwickl, JA McGuire, DM Hillis - Systematic biology, 2002 - ncbi.nlm.nih.gov
Until recently, it was believed that complex phylogenies might be extremely difficult to
reconstruct due to the phenomenal rate of increase in the number of possible phylogenies …

Nuclear phylogenomic analyses of asterids conflict with plastome trees and support novel relationships among major lineages

GW Stull, PS Soltis, DE Soltis… - American Journal of …, 2020 - Wiley Online Library
Premise Discordance between nuclear and organellar phylogenies (cytonuclear
discordance) is a well‐documented phenomenon at shallow evolutionary levels but has …