Genomic monitoring unveil the early detection of the SARS-CoV-2 B. 1.351 lineage (20H/501Y. V2) in Brazil

SN Slavov, JS Leister Patané, R Santos Bezerra… - medRxiv, 2021 - medrxiv.org
Abstract Sao Paulo State, the most populous area in Brazil, currently experiences a second
wave of the COVID-19 pandemic which overwhelmed the healthcare system. Recently, due …

[HTML][HTML] Emergence and spread of SARS-CoV-2 P. 1 (Gamma) lineage variants carrying Spike mutations 𝚫141-144, N679K or P681H during persistent viral …

F Naveca, V Nascimento, V Souza, A Corado… - image, 2021 - virological.org
The Amazonas was one of the most heavily affected Brazilian states by the COVID-19
epidemic that resulted in the infection of a large proportion of individuals from that state …

Development of a simple genotyping method based on indel mutations to rapidly screen SARS-CoV-2 circulating variants: Delta, Omicron BA. 1 and BA. 2

W Ayadi, A Taktak, S Gargouri, F Smaoui… - Journal of Virological …, 2022 - Elsevier
The high need of rapid and flexible tools that facilitate the identification of circulating SARS-
CoV-2 Variants of Concern (VOCs) remains crucial for public health system monitoring …

[HTML][HTML] The SARS-CoV-2 variant Delta displaced the variants Gamma and Gamma plus in Amazonas, Brazil

F Naveca, V Nascimento, V Souza… - Virological …, 2021 - virological.org
The COVID-19 epidemic in the Amazonas state, Brazil, during 2021 was driven by the
spread of the Variant of Concern (VOC) Gamma (lineage P. 1) and, more recently, of the …

Enhancing the epidemiological surveillance of SARS-CoV-2 using Sanger sequencing to identify circulating variants and recombinants

T Silva, E Oliveira, A Oliveira, A Menezes… - Brazilian Journal of …, 2024 - Springer
Since the emergence of SARS-CoV-2 in December 2019, more than 12,000 mutations in the
virus have been identified. These could cause changes in viral characteristics and directly …

Transmission dynamics of SARS-CoV-2 variants in the Brazilian state of Pará

CT Pinho, AF Vidal, TC Negri Rocha… - Frontiers in Public …, 2023 - frontiersin.org
Introduction After three years since the beginning of the pandemic, the new coronavirus
continues to raise several questions regarding its infectious process and host response …

Comparison of SARS-Cov-2 omicron variant with the previously identified SARS-Cov-2 variants in Egypt, 2020–2022: insight into SARS-Cov-2 genome evolution and …

A Kandeel, Y Moatasim, M Fahim, H Bahaaeldin… - BMC Infectious …, 2023 - Springer
Background The o severe acute respiratory coronavirus 2 (SARS-CoV-2) pandemic has
killed millions of people and caused widespread concern around the world. Multiple genetic …

SARS-CoV-2 genomic surveillance in Brazil: a systematic review with scientometric analysis

D Menezes, PLC Fonseca, JLF de Araújo, RP Souza - Viruses, 2022 - mdpi.com
Several studies have monitored the SARS-CoV-2 variants in Brazil throughout the
pandemic. Here, we systematically reviewed and conducted a scientometric analysis of the …

SARS-CoV-2 spike protein mutations in different variants: A comparison between vaccinated and unvaccinated population in western Amazonia

G Sgorlon, TP Roca, AM Passos-Silva… - … and Biology Insights, 2023 - journals.sagepub.com
The increased transmissibility of severe acute respiratory syndrome coronavirus 2 (SARS-
CoV-2) has generated variants of concern (VOCs) throughout the pandemic, responsible for …

Tracking the turnover of SARS-CoV-2 VOCs Gamma to Delta in a Brazilian state (Minas Gerais) with a high-vaccination status

PLC Fonseca, FRR Moreira, RM de Souza… - Virus …, 2022 - academic.oup.com
The emergence and global dissemination of Severe Acute Respiratory Syndrome virus 2
(SARS-CoV-2) variants of concern (VOCs) have been described as the main factor driving …