[PDF][PDF] BLUPF90 suite of programs for animal breeding with focus on genomics
The BLUPF90 suite is a collection of software for mixed-model analysis with focus on
breeding and genetics applications. Solving of mixed model equations and variance …
breeding and genetics applications. Solving of mixed model equations and variance …
Unknown‐parent groups in single‐step genomic evaluation
In single‐step genomic evaluation using best linear unbiased prediction (ss GBLUP),
genomic predictions are calculated with a relationship matrix that combines pedigree and …
genomic predictions are calculated with a relationship matrix that combines pedigree and …
Solving efficiently large single‐step genomic best linear unbiased prediction models
I Strandén, K Matilainen, GP Aamand… - Journal of Animal …, 2017 - Wiley Online Library
Single‐step genomic BLUP (ssGBLUP) requires a dense matrix of the size equal to the
number of genotyped animals in the coefficient matrix of mixed model equations (MME) …
number of genotyped animals in the coefficient matrix of mixed model equations (MME) …
Animal model for genetic evaluation of multibreed data
JW Arnold, JK Bertrand… - Journal of Animal …, 1992 - academic.oup.com
Extension of beef cattle genetic evaluation procedures to multibreed data sets is proposed
as a way to allow inclusion of crossbred animals into current analyses and to provide …
as a way to allow inclusion of crossbred animals into current analyses and to provide …
Crossbred evaluations using single-step genomic BLUP and algorithm for proven and young with different sources of data
I Pocrnic, DAL Lourenco, CY Chen… - Journal of animal …, 2019 - academic.oup.com
Genomic selection (GS) is routinely applied to many purebreds and lines of farm species.
However, this method can be extended to predictions across purebreds as well as for …
However, this method can be extended to predictions across purebreds as well as for …
Genomic prediction for crossbred performance using metafounders
EM van Grevenhof, J Vandenplas… - Journal of animal …, 2019 - academic.oup.com
Future genomic evaluation models to be used routinely in breeding programs for pigs and
poultry need to be able to optimally use information of crossbred (CB) animals to predict …
poultry need to be able to optimally use information of crossbred (CB) animals to predict …
Results of multivariate individual animal model genetic evaluations of British pedigree beef cattle
RE Crumps, G Simm, D Nicholson, RH Findlay… - Animal …, 1997 - cambridge.org
This paper reports the procedures put into place in the UK for the genetic evaluation of
pedigree beef cattle and estimation of genetic trends using a comprehensive model to allow …
pedigree beef cattle and estimation of genetic trends using a comprehensive model to allow …
[HTML][HTML] Experiences with a single-step genome evaluation
Genomic selection can be implemented based on the genomic relationship matrix (GBLUP)
and can be combined with phenotypes from nongenotyped animals through the use of best …
and can be combined with phenotypes from nongenotyped animals through the use of best …
DMU-a package for analyzing multivariate mixed models in quantitative genetics and genomics
P Madsen, J Jensen, R Labouriau… - 10th World Congress …, 2014 - pure.au.dk
The DMU-package for Analyzing Multivariate Mixed Models has been developed over a
period of more than 25 years. This paper gives an overview of new features and the recent …
period of more than 25 years. This paper gives an overview of new features and the recent …
[HTML][HTML] Single-step genomic evaluations from theory to practice: using SNP chips and sequence data in BLUPF90
Single-step genomic evaluation became a standard procedure in livestock breeding, and
the main reason is the ability to combine all pedigree, phenotypes, and genotypes available …
the main reason is the ability to combine all pedigree, phenotypes, and genotypes available …