High resolution mass spectrometry for structural identification of metabolites in metabolomics
E Rathahao-Paris, S Alves, C Junot, JC Tabet - Metabolomics, 2016 - Springer
High resolution mass spectrometry (HRMS) is increasingly used to produce metabolomics
data. Thanks to its high mass resolution and mass measurement accuracy, it is also very …
data. Thanks to its high mass resolution and mass measurement accuracy, it is also very …
Detailed investigation and comparison of the XCMS and MZmine 2 chromatogram construction and chromatographic peak detection methods for preprocessing mass …
XCMS and MZmine 2 are two widely used software packages for preprocessing untargeted
LC/MS metabolomics data. Both construct extracted ion chromatograms (EICs) and detect …
LC/MS metabolomics data. Both construct extracted ion chromatograms (EICs) and detect …
Evaluation of coverage, retention patterns, and selectivity of seven liquid chromatographic methods for metabolomics
S Wernisch, S Pennathur - Analytical and bioanalytical chemistry, 2016 - Springer
Liquid chromatography–mass spectrometry-based metabolomics studies require highly
selective and efficient chromatographic techniques. Typically employed reversed-phase …
selective and efficient chromatographic techniques. Typically employed reversed-phase …
New advances in separation science for metabolomics: resolving chemical diversity in a post-genomic era
NL Kuehnbaum, P Britz-McKibbin - Chemical reviews, 2013 - ACS Publications
Metabolomics offers a revolutionary framework for phenotyping individuals at a molecular
level that is needed for new breakthroughs in cell biology and personalized medicine. 1− 3 …
level that is needed for new breakthroughs in cell biology and personalized medicine. 1− 3 …
[HTML][HTML] metaX: a flexible and comprehensive software for processing metabolomics data
B Wen, Z Mei, C Zeng, S Liu - BMC bioinformatics, 2017 - Springer
Background Non-targeted metabolomics based on mass spectrometry enables high-
throughput profiling of the metabolites in a biological sample. The large amount of data …
throughput profiling of the metabolites in a biological sample. The large amount of data …
Untargeted large-scale plant metabolomics using liquid chromatography coupled to mass spectrometry
Untargeted metabolomics aims to gather information on as many metabolites as possible in
biological systems by taking into account all information present in the data sets. Here we …
biological systems by taking into account all information present in the data sets. Here we …
Mass spectrometry-based metabolomics: accelerating the characterization of discriminating signals by combining statistical correlations and ultrahigh resolution
E Werner, V Croixmarie, T Umbdenstock… - Analytical …, 2008 - ACS Publications
A strategy combining autocorrelation matrices and ultrahigh resolution mass spectrometry
(MS) was developed to optimize the characterization of discriminating ions highlighted by …
(MS) was developed to optimize the characterization of discriminating ions highlighted by …
[HTML][HTML] Trackable and scalable LC-MS metabolomics data processing using asari
Significant challenges remain in the computational processing of data from liquid
chomratography-mass spectrometry (LC-MS)-based metabolomic experiments into …
chomratography-mass spectrometry (LC-MS)-based metabolomic experiments into …
From exogenous to endogenous: the inevitable imprint of mass spectrometry in metabolomics
EJ Want, A Nordström, H Morita… - Journal of proteome …, 2007 - ACS Publications
Mass spectrometry (MS) is an established technology in drug metabolite analysis and is now
expanding into endogenous metabolite research. Its utility derives from its wide dynamic …
expanding into endogenous metabolite research. Its utility derives from its wide dynamic …
[HTML][HTML] GC–MS libraries for the rapid identification of metabolites in complex biological samples
N Schauer, D Steinhauser, S Strelkov, D Schomburg… - FEBS letters, 2005 - Elsevier
Gas chromatography–mass spectrometry based metabolite profiling of biological samples is
rapidly becoming one of the cornerstones of functional genomics and systems biology. Thus …
rapidly becoming one of the cornerstones of functional genomics and systems biology. Thus …