Whole mouse brain structural connectomics using magnetic resonance histology

N Wang, RJ Anderson, A Badea, G Cofer… - Brain Structure and …, 2018 - Springer
Diffusion tensor histology holds great promise for quantitative characterization of structural
connectivity in mouse models of neurological and psychiatric conditions. There has been …

Whole mouse brain connectomics

G Allan Johnson, N Wang, RJ Anderson… - Journal of …, 2019 - Wiley Online Library
Methods have been developed to allow quantitative connectivity of the whole fixed mouse
brain by means of magnetic resonance imaging (MRI). We have translated what we have …

[HTML][HTML] Mapping the subcortical connectome using in vivo diffusion MRI: Feasibility and reliability

J Kai, AR Khan, RAM Haast, JC Lau - NeuroImage, 2022 - Elsevier
Tractography combined with regions of interest (ROIs) has been used to non-invasively
study the structural connectivity of the cortex as well as to assess the reliability of these …

A diffusion MRI tractography connectome of the mouse brain and comparison with neuronal tracer data

E Calabrese, A Badea, G Cofer, Y Qi… - Cerebral …, 2015 - academic.oup.com
Interest in structural brain connectivity has grown with the understanding that abnormal
neural connections may play a role in neurologic and psychiatric diseases. Small animal …

The Human Connectome Project and beyond: initial applications of 300 mT/m gradients

JA McNab, BL Edlow, T Witzel, SY Huang, H Bhat… - Neuroimage, 2013 - Elsevier
The engineering of a 3 T human MRI scanner equipped with 300 mT/m gradients–the
strongest gradients ever built for an in vivo human MRI scanner–was a major component of …

Mapping the human connectome using diffusion MRI at 300 mT/m gradient strength: Methodological advances and scientific impact

Q Fan, C Eichner, M Afzali, L Mueller, CMW Tax… - Neuroimage, 2022 - Elsevier
Tremendous efforts have been made in the last decade to advance cutting-edge MRI
technology in pursuit of mapping structural connectivity in the living human brain with …

[HTML][HTML] Resolution and b value dependent structural connectome in ex vivo mouse brain

S Crater, S Maharjan, Y Qi, Q Zhao, G Cofer, JC Cook… - Neuroimage, 2022 - Elsevier
Diffusion magnetic resonance imaging has been widely used in both clinical and preclinical
studies to characterize tissue microstructure and structural connectivity. The diffusion MRI …

[PDF][PDF] Challenges and limitations of quantifying brain connectivity in vivo with diffusion MRI

DK Jones - Imaging in Medicine, 2010 - courses.cs.washington.edu
Background∎ Functional networks It is increasingly recognized that to fully understand the
function of the brain the 'localizationist'approach of yesteryear is no longer valid; rather, the …

[HTML][HTML] Optimizing diffusion imaging protocols for structural connectomics in mouse models of neurological conditions

RJ Anderson, CM Long, ED Calabrese… - Frontiers in …, 2020 - frontiersin.org
Network approaches provide sensitive biomarkers for neurological conditions, such as
Alzheimer's disease (AD). Mouse models can help advance our understanding of underlying …

Mapping the human connectome at multiple scales with diffusion spectrum MRI

L Cammoun, X Gigandet, D Meskaldji, JP Thiran… - Journal of neuroscience …, 2012 - Elsevier
The global structural connectivity of the brain, the human connectome, is now accessible at
millimeter scale with the use of MRI. In this paper, we describe an approach to map the …