[HTML][HTML] Towards reliable reconstruction of the mouse brain corticothalamic connectivity using diffusion MRI

TM Arefin, CH Lee, Z Liang, H Rallapalli, YZ Wadghiri… - Neuroimage, 2023 - Elsevier
Diffusion magnetic resonance imaging (dMRI) tractography has yielded intriguing insights
into brain circuits and their relationship to behavior in response to gene mutations or …

Building connectomes using diffusion MRI: why, how and but

SN Sotiropoulos, A Zalesky - NMR in Biomedicine, 2019 - Wiley Online Library
Why has diffusion MRI become a principal modality for mapping connectomes in vivo? How
do different image acquisition parameters, fiber tracking algorithms and other …

[HTML][HTML] Dimensionality reduction of diffusion MRI measures for improved tractometry of the human brain

M Chamberland, EP Raven, S Genc, K Duffy… - NeuroImage, 2019 - Elsevier
Various diffusion MRI (dMRI) measures have been proposed for characterising tissue
microstructure over the last 15 years. Despite the growing number of experiments using …

Direct visualization of the perforant pathway in the human brain with ex vivo diffusion tensor imaging

JC Augustinack, K Helmer, KE Huber… - Frontiers in human …, 2010 - frontiersin.org
Ex vivo magnetic resonance imaging yields high resolution images that reveal detailed
cerebral anatomy and explicit cytoarchitecture in the cerebral cortex, subcortical structures …

Measuring brain connectivity: diffusion tensor imaging validates resting state temporal correlations

P Skudlarski, K Jagannathan, VD Calhoun… - Neuroimage, 2008 - Elsevier
Diffusion tensor imaging (DTI) and resting state temporal correlations (RSTC) are two
leading techniques for investigating the connectivity of the human brain. They have been …

Mesoscale diffusion magnetic resonance imaging of the ex vivo human hippocampus

M Ly, L Foley, A Manivannan, TK Hitchens… - Human Brain …, 2020 - Wiley Online Library
Mesoscale diffusion magnetic resonance imaging (MRI) endeavors to bridge the gap
between macroscopic white matter tractography and microscopic studies investigating the …

Computing and visualising intra‐voxel orientation‐specific relaxation–diffusion features in the human brain

JP de Almeida Martins, CMW Tax… - Human brain …, 2021 - Wiley Online Library
Diffusion MRI techniques are used widely to study the characteristics of the human brain
connectome in vivo. However, to resolve and characterise white matter (WM) fibres in …

Brain without anatomy: construction and comparison of fully network-driven structural MRI connectomes

O Tymofiyeva, E Ziv, AJ Barkovich, CP Hess, D Xu - PloS one, 2014 - journals.plos.org
MRI connectomics methods treat the brain as a network and provide new information about
its organization, efficiency, and mechanisms of disruption. The most commonly used method …

Reproducibility and intercorrelation of graph theoretical measures in structural brain connectivity networks

T Roine, B Jeurissen, D Perrone, J Aelterman… - Medical image …, 2019 - Elsevier
Diffusion-weighted magnetic resonance imaging can be used to non-invasively probe the
brain microstructure. In addition, recent advances have enabled the identification of complex …

SIFT: Spherical-deconvolution informed filtering of tractograms

RE Smith, JD Tournier, F Calamante, A Connelly - Neuroimage, 2013 - Elsevier
Diffusion MRI allows the structural connectivity of the whole brain (the 'tractogram') to be
estimated in vivo non-invasively using streamline tractography. The biological accuracy of …