Horizontal transfer of antibiotic resistance genes in the human gut microbiome

RS McInnes, GE McCallum, LE Lamberte… - Current opinion in …, 2020 - Elsevier
Highlights•The human gut microbiome harbours antibiotic resistance genes ('the
resistome').•Antibiotic resistance genes can spread in the gut microbiome through horizontal …

Probiotics impact the antibiotic resistance gene reservoir along the human GI tract in a person-specific and antibiotic-dependent manner

E Montassier, R Valdés-Mas, E Batard, N Zmora… - Nature …, 2021 - nature.com
Antimicrobial resistance poses a substantial threat to human health. The gut microbiome is
considered a reservoir for potential spread of resistance genes from commensals to …

Global environmental resistome: Distinction and connectivity across diverse habitats benchmarked by metagenomic analyses

X Yin, L Li, X Chen, YY Liu, TTY Lam, E Topp, T Zhang - Water research, 2023 - Elsevier
The widely distributed antibiotic resistance genes (ARGs) were unevenly proliferated in
various habitats. Great endeavors are needed to resolve the resistome features that can …

[HTML][HTML] Exploration of the antibiotic resistome in a wastewater treatment plant by a nine-year longitudinal metagenomic study

X Yin, Y Deng, L Ma, Y Wang, LYL Chan… - Environment international, 2019 - Elsevier
The spread of antibiotic resistance genes (ARGs) is a growing global problem. Activated
sludge (AS) in wastewater treatment plants (WWTPs) has been proposed as a hotspot for …

Novel resistance functions uncovered using functional metagenomic investigations of resistance reservoirs

EC Pehrsson, KJ Forsberg, MK Gibson… - Frontiers in …, 2013 - frontiersin.org
Rates of infection with antibiotic-resistant bacteria have increased precipitously over the past
several decades, with far-reaching healthcare and societal costs. Recent evidence has …

Next-generation approaches to understand and combat the antibiotic resistome

TS Crofts, AJ Gasparrini, G Dantas - Nature Reviews Microbiology, 2017 - nature.com
Antibiotic resistance is a natural feature of diverse microbial ecosystems. Although recent
studies of the antibiotic resistome have highlighted barriers to the horizontal transfer of …

Coexistence of antibiotic resistance genes and virulence factors deciphered by large-scale complete genome analysis

Y Pan, J Zeng, L Li, J Yang, Z Tang, W Xiong, Y Li… - Msystems, 2020 - Am Soc Microbiol
Widespread use of antibiotics has enhanced the evolution of highly resilient pathogens and
poses a severe risk to human health via coselection of antibiotic resistance genes (ARGs) …

Antibiotic resistance gene diversity and virulence gene diversity are correlated in human gut and environmental microbiomes

P Escudeiro, J Pothier, F Dionisio, T Nogueira - Msphere, 2019 - Am Soc Microbiol
Human beings have used large amounts of antibiotics, not only in medical contexts but also,
for example, as growth factors in agriculture and livestock, resulting in the contamination of …

A bioinformatic analysis of integrative mobile genetic elements highlights their role in bacterial adaptation

MG Durrant, MM Li, BA Siranosian, SB Montgomery… - Cell host & …, 2020 - cell.com
Mobile genetic elements (MGEs) contribute to bacterial adaptation and evolution; however,
high-throughput, unbiased MGE detection remains challenging. We describe MGEfinder, a …

The association between insertion sequences and antibiotic resistance genes

M Razavi, E Kristiansson, CF Flach, DGJ Larsson - Msphere, 2020 - Am Soc Microbiol
Insertion sequences (ISs) are abundant mobile genetic elements on bacterial genomes,
responsible for mobilization of many genes, including antibiotic resistance genes (ARGs). As …