An improved method for chloroplast genome sequencing in non-model forest tree species
Chloroplast genomes can provide a large amount of information and resources for use in
studies on plant evolution and molecular ecology. However, a rapid and efficient method for …
studies on plant evolution and molecular ecology. However, a rapid and efficient method for …
Highly effective sequencing whole chloroplast genomes of angiosperms by nine novel universal primer pairs
JB Yang, DZ Li, HT Li - Molecular ecology resources, 2014 - Wiley Online Library
Chloroplast genomes supply indispensable information that helps improve the phylogenetic
resolution and even as organelle‐scale barcodes. Next‐generation sequencing …
resolution and even as organelle‐scale barcodes. Next‐generation sequencing …
Reference-based assembly of chloroplast genome from leaf transcriptome data of Pterocarpus santalinus
Chloroplast genome sequencing is an essential tool to understand genome evolution and
phylogenetic relationship. The available methods for constructing chloroplast genome …
phylogenetic relationship. The available methods for constructing chloroplast genome …
Fifteen novel universal primer pairs for sequencing whole chloroplast genomes and a primer pair for nuclear ribosomal DNAs
T Zhang, CX Zeng, JB Yang, HT Li… - Journal of Systematics …, 2016 - Wiley Online Library
Chloroplast genome information helps improve the phylogenetic resolution and can act as
organelle‐scale barcodes in recently radiated plant groups. Previously we reported that nine …
organelle‐scale barcodes in recently radiated plant groups. Previously we reported that nine …
Comparative assessment shows the reliability of chloroplast genome assembly using RNA-seq
Chloroplast genomes (cp genomes) are widely used in comparative genomics, population
genetics, and phylogenetic studies. Obtaining chloroplast genomes from RNA-Seq data …
genetics, and phylogenetic studies. Obtaining chloroplast genomes from RNA-Seq data …
Whole genome sequencing of enriched chloroplast DNA using the Illumina GAII platform
RA Atherton, BJ McComish, LD Shepherd, LA Berry… - Plant methods, 2010 - Springer
Background Complete chloroplast genome sequences provide a valuable source of
molecular markers for studies in molecular ecology and evolution of plants. To obtain …
molecular markers for studies in molecular ecology and evolution of plants. To obtain …
Comparative Analysis of the Complete Chloroplast Genomes of Four Chestnut Species (Castanea)
H Zhou, X Gao, K Woeste, P Zhao, S Zhang - Forests, 2021 - mdpi.com
Chloroplast (cp) DNA genomes are traditional workhorses for studying the evolution of
species and reconstructing phylogenetic relationships in plants. Species of the genus …
species and reconstructing phylogenetic relationships in plants. Species of the genus …
Pyrosequencing of the northern red oak (Quercus rubra L.) chloroplast genome reveals high quality polymorphisms for population management
LW Alexander, KE Woeste - Tree Genetics & Genomes, 2014 - Springer
Given the low intraspecific chloroplast diversity detected in northern red oak (Quercus rubra
L.), more powerful genetic tools are necessary to accurately characterize Q. rubra …
L.), more powerful genetic tools are necessary to accurately characterize Q. rubra …
De Novo Assembly of Complete Chloroplast Genomes from Non-model Species Based on a K-mer Frequency-Based Selection of Chloroplast Reads from Total DNA …
S Izan, D Esselink, RGF Visser… - Frontiers in Plant …, 2017 - frontiersin.org
Whole Genome Shotgun (WGS) sequences of plant species often contain an abundance of
reads that are derived from the chloroplast genome. Up to now these reads have generally …
reads that are derived from the chloroplast genome. Up to now these reads have generally …
Assembly of chloroplast genomes with long- and short-read data: a comparison of approaches using Eucalyptus pauciflora as a test case
Background Chloroplasts are organelles that conduct photosynthesis in plant and algal
cells. The information chloroplast genome contained is widely used in agriculture and …
cells. The information chloroplast genome contained is widely used in agriculture and …
相关搜索
- genome sequencing chloroplast dna
- chloroplast genomes chestnut species
- assembly and annotation chloroplast genome
- quercus rubra chloroplast genome
- chloroplast genomes eucalyptus pauciflora
- chloroplast genomes comparison of approaches
- picea rubens chloroplast genome
- pterocarpus santalinus chloroplast genome
- red spruce chloroplast genome
- population management chloroplast genome
- phylogenetic analysis chloroplast genome
- sequence repeats chloroplast genome