Plant long non-coding RNAs in the regulation of transcription

JA Chekanova - Essays in Biochemistry, 2021 - portlandpress.com
Eukaryotic genomes are pervasively transcribed, producing large numbers of non-coding
RNAs (ncRNAs), including tens of thousands of long ncRNAs (lncRNAs), defined as …

Plant senescence: how plants know when and how to die

HR Woo, C Masclaux-Daubresse… - Journal of Experimental …, 2018 - academic.oup.com
716| Special Issue Editorial coordination at multiple levels. Their review also emphasizes
the necessity of understanding leaf senescence as a life history strategy from the …

[HTML][HTML] Epigenetic modifications: Allusive clues of lncRNA functions in plants

W Yang, Q Bai, Y Li, J Chen, C Liu - Computational and Structural …, 2023 - Elsevier
Long non-coding RNAs (lncRNAs) have been verified as flexible and important factors in
various biological processes of multicellular eukaryotes, including plants. The respective …

Genomic features and regulatory roles of intermediate-sized non-coding RNAs in Arabidopsis

Y Wang, X Wang, W Deng, X Fan, TT Liu, G He… - Molecular plant, 2014 - cell.com
Recent advances in genome-wide techniques allowed the identification of thousands of non-
coding RNAs with various sizes in eukaryotes, some of which have further been shown to …

CANTATAdb: a collection of plant long non-coding RNAs

MW Szcześniak, W Rosikiewicz… - Plant and Cell …, 2016 - academic.oup.com
Long non-coding RNAs (lncRNAs) represent a class of potent regulators of gene expression
that are found in a wide array of eukaryotes; however, our knowledge about these molecules …

Long noncoding RNA transcriptome of plants

J Liu, H Wang, NH Chua - Plant biotechnology journal, 2015 - Wiley Online Library
Since their discovery more than two decades ago, animal long noncoding RNA s (lnc RNA
s) have emerged as important regulators of many biological processes. Recently, a large …

Revealing the novel complexity of plant long non-coding RNA by strand-specific and whole transcriptome sequencing for evolutionarily representative plant species

Y Zhu, L Chen, X Hong, H Shi, X Li - BMC genomics, 2022 - Springer
Background Previous studies on plant long noncoding RNAs (lncRNAs) lacked consistency
and suffered from many factors like heterogeneous data sources and experimental …

Deciphering shared attributes of plant long non-coding RNAs through a comparative computational approach

VK Yadav, SK Jalmi, S Tiwari, S Kerkar - Scientific Reports, 2023 - nature.com
Over the past decade, long non-coding RNA (lncRNA), which lacks protein-coding potential,
has emerged as an essential regulator of the genome. The present study examined 13,599 …

Long noncoding RNAs in Brassica rapa L. following vernalization

DJ Shea, N Nishida, S Takada, E Itabashi… - Scientific reports, 2019 - nature.com
Brassica rapa L. is an important agricultural crop that requires a period of prolonged cold for
flowering. This process is known as vernalization. Studies have shown that long noncoding …

Discovery, identification, and functional characterization of long noncoding RNAs in Arachis hypogaea L.

H Tian, F Guo, Z Zhang, H Ding, J Meng, X Li, Z Peng… - BMC plant biology, 2020 - Springer
Abstract Background Long noncoding RNAs (lncRNAs), which are typically> 200 nt in
length, are involved in numerous biological processes. Studies on lncRNAs in the cultivated …