[PDF][PDF] Genomic characterization of a novel SARS-CoV-2 lineage from Rio de Janeiro, Brazil

U Workgroup, L Workgroup, AC Cavalcanti… - J. Virol, 2021 - researchgate.net
Almost simultaneously, several studies reported the emergence of novel SARS-CoV-2
lineages 28 characterized by their phylogenetic and genetic distinction (1),(2),(3),(4). Here …

[HTML][HTML] Global SARS-CoV-2 genomic surveillance: What we have learned (so far)

S Tosta, K Moreno, G Schuab, V Fonseca… - Infection, Genetics and …, 2023 - Elsevier
The COVID-19 pandemic has brought significant challenges for genomic surveillance
strategies in public health systems worldwide. During the past thirty-four months, many …

[HTML][HTML] Genetic spectrum and distinct evolution patterns of SARS-CoV-2

S Liu, J Shen, S Fang, K Li, J Liu, L Yang… - Frontiers in …, 2020 - frontiersin.org
Four signature groups of frequently occurred single-nucleotide variants (SNVs) were
identified in over twenty-eight thousand high-quality and high-coverage SARS-CoV-2 …

The impact of super-spreaders in COVID-19: mapping genome variation worldwide

A Gómez-Carballa, X Bello, J Pardo-Seco… - bioRxiv, 2020 - biorxiv.org
The human pathogen severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is
responsible for the major pandemic of the 21st century. We analyzed> 4,700 SARS-CoV-2 …

[HTML][HTML] Geographical distribution of genetic variants and lineages of SARS-CoV-2 in Chile

AE Castillo, B Parra, P Tapia, J Lagos, L Arata… - Frontiers in public …, 2020 - frontiersin.org
The pandemic caused by the new severe acute respiratory syndrome coronavirus 2 (SARS-
CoV-2) is a worldwide public health concern. First confined in China and then disseminated …

Snapshot of the evolution and mutation patterns of SARS-CoV-2

J Zhao, J Sun, WT He, X Ji, Q Gao, X Zhai, MA Suchard… - BioRxiv, 2020 - biorxiv.org
The COVID-19 pandemic is the most important public health threat in recent history. Here we
study how its causal agent, SARS-CoV-2, has diversified genetically since its first …

[HTML][HTML] The phylodynamics of SARS-CoV-2 during 2020 in Finland

P Truong Nguyen, R Kant, F Van den Broeck… - Communications …, 2022 - nature.com
Background Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has caused
millions of infections and fatalities globally since its emergence in late 2019. The virus was …

[HTML][HTML] Early phylogenetic diversification of SARS-CoV-2: determination of variants and the effect on epidemiology, immunology, and diagnostics

R Kaden - Journal of Clinical Medicine, 2020 - mdpi.com
The phylogenetic clustering of 95 SARS-CoV-2 sequences from the first 3 months of the
pandemic reveals insights into the early evolution of the virus and gives first indications of …

Mutation hotspots, geographical and temporal distribution of SARS-CoV-2 lineages in Brazil, February 2020 to February 2021: insights and limitations from uneven …

VB Franceschi, PAG Ferrareze, RA Zimerman… - medRxiv, 2021 - medrxiv.org
The COVID-19 pandemic has already reached approximately 110 million people and it is
associated with 2.5 million deaths worldwide. Brazil is the third worst-hit country, with …

[HTML][HTML] Genomic epidemiology of the SARS-CoV-2 epidemic in Brazil

M Giovanetti, SN Slavov, V Fonseca, E Wilkinson… - Nature …, 2022 - nature.com
The high numbers of COVID-19 cases and deaths in Brazil have made Latin America an
epicentre of the pandemic. SARS-CoV-2 established sustained transmission in Brazil early …