Metabolome and transcriptome association analysis reveals dynamic regulation of purine metabolism and flavonoid synthesis in transdifferentiation during somatic …

H Guo, H Guo, L Zhang, Z Tang, X Yu, J Wu… - International Journal of …, 2019 - mdpi.com
Plant regeneration via somatic embryogenesis (SE) is a key step during genetic
engineering. In the current study, integrated widely targeted metabolomics and RNA …

Transcript profiling reveals complex auxin signalling pathway and transcription regulation involved in dedifferentiation and redifferentiation during somatic …

X Yang, X Zhang, D Yuan, F Jin, Y Zhang, J Xu - BMC plant biology, 2012 - Springer
Background Somatic embryogenesis (SE), by which somatic cells of higher plants can
dedifferentiate and reorganize into new plants, is a notable illustration of cell totipotency …

De novo transcriptome analysis reveals insights into dynamic homeostasis regulation of somatic embryogenesis in upland cotton (G. hirsutum L.)

WH Cheng, HG Zhu, WG Tian, SH Zhu, XP Xiong… - Plant Molecular …, 2016 - Springer
Plant regeneration via somatic embryogenesis (SE) is the key step for genetic improvement
of cotton (Gossypium hirsutum L.) through genetic engineering mediated by Agrobacteria …

T ranscriptome Profiling Reveals Auxin and Cytokinin Regulating Somatic Embryogenesis in Different Sister Lines of Cotton Cultivar CCRI24

Z Xu, C Zhang, X Zhang, C Liu, Z Wu… - Journal of integrative …, 2013 - Wiley Online Library
To get a broader view on the molecular mechanisms underlying somatic embryogenesis
(SE) in cotton (Gossypium hirsutum L.), global analysis of cotton transcriptome dynamics …

iTRAQ-based comparative proteomic analysis provides insights into somatic embryogenesis in Gossypium hirsutum L.

HG Zhu, WH Cheng, WG Tian, YJ Li, F Liu, F Xue… - Plant Molecular …, 2018 - Springer
Key message iTRAQ based proteomic identified key proteins and provided new insights into
the molecular mechanisms underlying somatic embryogenesis in cotton. Abstract Somatic …

ROS homeostasis regulates somatic embryogenesis via the regulation of auxin signaling in cotton

T Zhou, X Yang, K Guo, J Deng, J Xu, W Gao… - Molecular & Cellular …, 2016 - ASBMB
Somatic embryogenesis (SE) is a versatile model for understanding the mechanisms of plant
embryogenesis and a useful tool for plant propagation. To decipher the intricate molecular …

Comparative transcriptome analysis of SE initial dedifferentiation in cotton of different SE capability

A Cao, Y Zheng, Y Yu, X Wang, D Shao, J Sun, B Cui - Scientific reports, 2017 - nature.com
Somatic embryogenesis (SE) is a critical transition from vegetative to embryogenic growth in
higher plants; however, few studies have investigated the mechanism that regulates SE …

Multi‐omics analyses reveal epigenomics basis for cotton somatic embryogenesis through successive regeneration acclimation process

J Li, M Wang, Y Li, Q Zhang, K Lindsey… - Plant biotechnology …, 2019 - Wiley Online Library
Plant regeneration via somatic embryogenesis is time‐consuming and highly genotype‐
dependent. The plant somatic embryogenesis process provokes many epigenetics changes …

Comparative metabolome analysis of wheat embryo and endosperm reveals the dynamic changes of metabolites during seed germination

C Han, S Zhen, G Zhu, Y Bian, Y Yan - Plant Physiology and Biochemistry, 2017 - Elsevier
In this study, we performed the first comparative metabolomic analysis of the wheat embryo
and endosperm during seed germination using GC-MS/MS. In total, 82 metabolites were …

Current proteomic and metabolomic knowledge of zygotic and somatic embryogenesis in plants

J Juarez-Escobar, E Bojórquez-Velázquez… - International journal of …, 2021 - mdpi.com
Embryogenesis is the primary developmental program in plants. The mechanisms that
underlie the regulation of embryogenesis are an essential research subject given its …