Global profiling of stimulus-induced polyadenylation in cells using a poly (A) trap
Polyadenylation of mRNA leads to increased protein expression in response to diverse
stimuli, but it is difficult to identify mRNAs that become polyadenylated in living cells. Here …
stimuli, but it is difficult to identify mRNAs that become polyadenylated in living cells. Here …
RNA processing and its regulation: global insights into biological networks
DD Licatalosi, RB Darnell - Nature Reviews Genetics, 2010 - nature.com
In recent years views of eukaryotic gene expression have been transformed by the finding
that enormous diversity can be generated at the RNA level. Advances in technologies for …
that enormous diversity can be generated at the RNA level. Advances in technologies for …
Computational analysis of 3′-ends of ESTs shows four classes of alternative polyadenylation in human, mouse, and rat
J Yan, TG Marr - Genome research, 2005 - genome.cshlp.org
Alternative initiation, splicing, and polyadenylation are key mechanisms used by many
organisms to generate diversity among mature mRNA transcripts originating from the same …
organisms to generate diversity among mature mRNA transcripts originating from the same …
[HTML][HTML] Recognition of GU‐rich polyadenylation regulatory elements by human CstF‐64 protein
JMP Cañadillas, G Varani - The EMBO journal, 2003 - embopress.org
Vertebrate polyadenylation sites are identified by the AAUAAA signal and by GU‐rich
sequences downstream of the cleavage site. These are recognized by a heterotrimeric …
sequences downstream of the cleavage site. These are recognized by a heterotrimeric …
Puf1p acts in combination with other yeast Puf proteins to control mRNA stability
RJ Ulbricht, WM Olivas - Rna, 2008 - rnajournal.cshlp.org
The eukaryotic Puf proteins bind 3′ untranslated region (UTR) sequence elements to
regulate the stability and translation of their target transcripts, and such regulatory events are …
regulate the stability and translation of their target transcripts, and such regulatory events are …
Targeted translational regulation using the PUF protein family scaffold
A Cooke, A Prigge, L Opperman… - Proceedings of the …, 2011 - National Acad Sciences
Regulatory complexes formed on mRNAs control translation, stability, and localization.
These complexes possess two activities: one that binds RNA and another—the effector …
These complexes possess two activities: one that binds RNA and another—the effector …
A complex gene regulatory mechanism that operates at the nexus of multiple RNA processing decisions
DS McPheeters, N Cremona, S Sunder… - Nature structural & …, 2009 - nature.com
Expression of crs1 pre-mRNA, encoding a meiotic cyclin, is blocked in actively growing
fission yeast cells by a multifaceted mechanism. The most striking feature is that in …
fission yeast cells by a multifaceted mechanism. The most striking feature is that in …
Inhibition of polyadenylation by stable RNA secondary structure
BIF Klasens, AT Das, B Berkhout - Nucleic acids research, 1998 - academic.oup.com
The presence of a polyadenylation signal in the repeat (R) region of the HIV-1 genome,
which is located at both the 5′ and 3′ ends of the viral transcripts, requires differential …
which is located at both the 5′ and 3′ ends of the viral transcripts, requires differential …
Implications of polyadenylation in health and disease
Polyadenylation is the RNA processing step that completes the maturation of nearly all
eukaryotic mRNAs. It is a two-step nuclear process that involves an endonucleolytic …
eukaryotic mRNAs. It is a two-step nuclear process that involves an endonucleolytic …
Activating gene expression in mammalian cells with promoter-targeted duplex RNAs
BA Janowski, ST Younger, DB Hardy, R Ram… - Nature chemical …, 2007 - nature.com
The ability to selectively activate or inhibit gene expression is fundamental to understanding
complex cellular systems and developing therapeutics. Recent studies have demonstrated …
complex cellular systems and developing therapeutics. Recent studies have demonstrated …