Joint multipoint linkage analysis of multivariate qualitative and quantitative traits. I. Likelihood formulation and simulation results

JT Williams, P Van Eerdewegh, L Almasy… - The American Journal of …, 1999 - cell.com
We describe a variance-components method for multipoint linkage analysis that allows joint
consideration of a discrete trait and a correlated continuous biological marker (eg, a disease …

Back to basics for Bayesian model building in genomic selection

HP Kärkkäinen, MJ Sillanpää - Genetics, 2012 - academic.oup.com
Numerous Bayesian methods of phenotype prediction and genomic breeding value
estimation based on multilocus association models have been proposed. Computationally …

THE ANALYSIS OF QUANTITATIVE TRAITS FOR SIMPLE GENETIC MODELS FROM PARENTAL, F1 AND BACKCROSS DATA

RC Elston, J Stewart - Genetics, 1973 - academic.oup.com
The following models are considered for the genetic determination of quantitative traits:
segregation at one locus, at two linked loci, at any number of equal and additive unlinked …

[PDF][PDF] Pedigree analysis package

SJ Hasstedt - Department of Human Genetics, University of Utah, Slat …, 1994 - Citeseer
The Pedigree Analysis Package (PAP) comprises a set of FORTRAN 90 programs for
computing likelihoods [Elston & Stewart 1971] or simulating phenotypes on pedigree …

A defense of path analysis in genetic epidemiology.

CR Cloninger, DC Rao, J Rice, T Reich… - American Journal of …, 1983 - ncbi.nlm.nih.gov
Contemporary models of multifactorial inheritance are described and justified from the
perspective of their intended use in genetic epidemiology and their developmental …

Genomic-assisted prediction of genetic value with semiparametric procedures

D Gianola, RL Fernando, A Stella - Genetics, 2006 - academic.oup.com
Semiparametric procedures for prediction of total genetic value for quantitative traits, which
make use of phenotypic and genomic data simultaneously, are presented. The methods …

A simple algorithm to estimate genetic variance in an animal threshold model using Bayesian inference

J Ødegård, THE Meuwissen, B Heringstad… - Genetics Selection …, 2010 - Springer
Background In the genetic analysis of binary traits with one observation per animal, animal
threshold models frequently give biased heritability estimates. In some cases, this problem …

Computer-simulation methods in human linkage analysis.

J Ott - Proceedings of the National Academy of Sciences, 1989 - National Acad Sciences
In human linkage analysis, many statistical problems without analytical solution could be
solved by ad hoc Monte Carlo procedures were efficient computer-simulation methods …

The estimation of the genetic correlation: the use of the jackknife

DA Roff, R Preziosi - Heredity, 1994 - nature.com
To understand fully the process of evolution of quantitative traits it is necessary to be able to
estimate the genetic correlation and its associated standard error. At present, estimation …

Modeling quantitative trait loci and interpretation of models

ZB Zeng, T Wang, W Zou - Genetics, 2005 - academic.oup.com
A quantitative genetic model relates the genotypic value of an individual to the alleles at the
loci that contribute to the variation in a population in terms of additive, dominance, and …