Convergence of human and Old World monkey gut microbiomes demonstrates the importance of human ecology over phylogeny

KR Amato, EK Mallott, D McDonald, NJ Dominy… - Genome biology, 2019 - Springer
Background Comparative data from non-human primates provide insight into the processes
that shaped the evolution of the human gut microbiome and highlight microbiome traits that …

Plasticity in the human gut microbiome defies evolutionary constraints

A Gomez, AK Sharma, EK Mallott, KJ Petrzelkova… - MSphere, 2019 - Am Soc Microbiol
The gut microbiome of primates, including humans, is reported to closely follow host
evolutionary history, with gut microbiome composition being specific to the genetic …

Gut microbial intersections with human ecology and evolution

KR Amato, RN Carmody - Annual Review of Anthropology, 2023 - annualreviews.org
Although microbiome science is relatively young, our knowledge of human-microbiome
interactions is growing rapidly and has already begun to transform our understanding of …

Rapid changes in the gut microbiome during human evolution

AH Moeller, Y Li, E Mpoudi Ngole… - Proceedings of the …, 2014 - National Acad Sciences
Humans are ecosystems containing trillions of microorganisms, but the evolutionary history
of this microbiome is obscured by a lack of knowledge about microbiomes of African apes …

Characterization of the fecal microbiome from non-human wild primates reveals species specific microbial communities

S Yildirim, CJ Yeoman, M Sipos, M Torralba… - PloS one, 2010 - journals.plos.org
Background Host-associated microbes comprise an integral part of animal digestive systems
and these interactions have a long evolutionary history. It has been hypothesized that the …

The gut microbiome of nonhuman primates: lessons in ecology and evolution

JB Clayton, A Gomez, K Amato… - American journal of …, 2018 - Wiley Online Library
The mammalian gastrointestinal (GI) tract is home to trillions of bacteria that play a
substantial role in host metabolism and immunity. While progress has been made in …

Functional host-specific adaptation of the intestinal microbiome in hominids

MC Rühlemann, C Bang, JF Gogarten… - Nature …, 2024 - nature.com
Fine-scale knowledge of the changes in composition and function of the human gut
microbiome compared that of our closest relatives is critical for understanding the …

Captivity humanizes the primate microbiome

JB Clayton, P Vangay, HU Huang… - Proceedings of the …, 2016 - National Acad Sciences
The primate gastrointestinal tract is home to trillions of bacteria, whose composition is
associated with numerous metabolic, autoimmune, and infectious human diseases …

Primate microbiomes over time: Longitudinal answers to standing questions in microbiome research

JR Björk, M Dasari, L Grieneisen… - American journal of …, 2019 - Wiley Online Library
To date, most insights into the processes shaping vertebrate gut microbiomes have emerged
from studies with cross‐sectional designs. While this approach has been valuable, emerging …

Incorporating the gut microbiota into models of human and non‐human primate ecology and evolution

KR Amato - American journal of physical anthropology, 2016 - Wiley Online Library
The mammalian gut is home to a diverse community of microbes. Advances in technology
over the past two decades have allowed us to examine this community, the gut microbiota, in …