LegumeIP: an integrative database for comparative genomics and transcriptomics of model legumes

J Li, X Dai, T Liu, PX Zhao - Nucleic acids research, 2012 - academic.oup.com
Legumes play a vital role in maintaining the nitrogen cycle of the biosphere. They conduct
symbiotic nitrogen fixation through endosymbiotic relationships with bacteria in root nodules …

Deciphering the regulatory network of miR156 in plant architecture and abiotic stress resistance of alfalfa (Medicago sativa) by transcriptome sequencing

H Zhang, S Jia, M Zhang, K Wang, F Teng, Y Liu… - Industrial Crops and …, 2022 - Elsevier
To improve alfalfa (Medicago sativa) biomass yield and abiotic stress resistance is a
challenge due to its autotetraploidy and self-incompatibility. Previously we have generated …

The development of 204 novel EST-SSRs and their use for genetic diversity analyses in cultivated alfalfa

Q Zhou, T Chen, Y Wang, Z Liu - Biochemical Systematics and Ecology, 2014 - Elsevier
Cultivated alfalfa (Medicago sativa L.) is one of the most important forage legume in the
world. Here, we report the development of 204 novel polymorphic expressed sequence tag …

Legume genomics: understanding biology through DNA and RNA sequencing

JA O'Rourke, YT Bolon, B Bucciarelli… - Annals of …, 2014 - academic.oup.com
Background The legume family (Leguminosae) consists of approx. 17 000 species. A few of
these species, including, but not limited to, Phaseolus vulgaris, Cicer arietinum and Cajanus …

[HTML][HTML] Transcriptome sequencing of lentil based on second-generation technology permits large-scale unigene assembly and SSR marker discovery

S Kaur, NOI Cogan, LW Pembleton, M Shinozuka… - BMC genomics, 2011 - Springer
Abstract Background Lentil (Lens culinaris Medik.) is a cool-season grain legume which
provides a rich source of protein for human consumption. In terms of genomic resources …

[HTML][HTML] Comparison of structural variants in the whole genome sequences of two Medicago truncatula ecotypes: Jemalong A17 and R108

A Li, A Liu, S Wu, K Qu, H Hu, J Yang, N Shrestha… - BMC Plant …, 2022 - Springer
Abstract Background Structural variants (SVs) constitute a large proportion of the genomic
variation that results in phenotypic variation in plants. However, they are still a largely …

[HTML][HTML] Transcript profiling of two alfalfa genotypes with contrasting cell wall composition in stems using a cross-species platform: optimizing analysis by masking …

SS Yang, WW Xu, M Tesfaye, JAFS Lamb, HJG Jung… - BMC genomics, 2010 - Springer
Abstract Background The GeneChip® Medicago Genome Array, developed for Medicago
truncatula, is a suitable platform for transcript profiling in tetraploid alfalfa [Medicago sativa …

Genome-wide development and utilization of novel intron-length polymorphic (ILP) markers in Medicago sativa

Z Zhang, X Min, Z Wang, Y Wang, Z Liu, W Liu - Molecular Breeding, 2017 - Springer
Alfalfa (Medicago sativa L.) is the most widely cultivated forage legume around the world.
Though development and application of microsatellite markers in large-scale was reported …

Medicago truncatula EST-SSRs reveal cross-species genetic markers for Medicago spp.

I Eujayl, MK Sledge, L Wang, GD May… - Theoretical and Applied …, 2004 - Springer
Expressed sequence tags (ESTs) are important resources for gene discovery and molecular
marker development. From over 147,000 ESTs of Medicago truncatula, we have identified …

[HTML][HTML] Applied genetics and genomics in alfalfa breeding

X Li, EC Brummer - Agronomy, 2012 - mdpi.com
Alfalfa (Medicago sativa L.), a perennial and outcrossing species, is a widely planted forage
legume for hay, pasture and silage throughout the world. Currently, alfalfa breeding relies on …