Network Analysis Prioritizes DEWAX and ICE1 as the Candidate Genes for Major eQTL Hotspots in Seed Germination of Arabidopsis thaliana

M Hartanto, RVL Joosen, BL Snoek… - G3: Genes …, 2020 - academic.oup.com
Seed germination is characterized by a constant change of gene expression across different
time points. These changes are related to specific processes, which eventually determine …

[HTML][HTML] Quantitative trait locus mapping combined with RNA sequencing reveals the molecular basis of seed germination in oilseed rape

K Yu, Y He, Y Li, Z Li, J Zhang, X Wang, E Tian - Biomolecules, 2021 - mdpi.com
Rapid and uniform seed germination improves mechanized oilseed rape production in
modern agricultural cultivation practices. However, the molecular basis of seed germination …

Embryo transcriptome and miRNA analyses reveal the regulatory network of seed dormancy in Ginkgo biloba

Z Jia, B Zhao, S Liu, Z Lu, B Chang, H Jiang… - Tree …, 2021 - academic.oup.com
Seed dormancy is crucial for plant survival and prevents seed germination out of season.
However, little is known about the regulatory mechanism of morphophysiological seed …

Comparative transcriptome profiling and co-expression network analysis reveals functionally coordinated genes associated with metabolic processes of Andrographis …

P Sharma, S Kumar, S Beriwal, P Sharma… - Plant Gene, 2020 - Elsevier
Natural products and secondary metabolites are produced through plant biosynthetic
pathways and hold enormous opportunities for treating human ailments. Andrographis …

[HTML][HTML] Transcriptome analysis of rice embryo and endosperm during seed germination

H Zhang, G Chen, H Xu, S Jing, Y Jiang, Z Liu… - International Journal of …, 2023 - mdpi.com
Seed germination is a complex, multistage developmental process that is an important step
in plant development. In this study, RNA-Seq was conducted in the embryo and endosperm …

[HTML][HTML] Transcriptome analysis of Cymbidium sinense and its application to the identification of genes associated with floral development

J Zhang, K Wu, S Zeng, JA Teixeira da Silva, X Zhao… - BMC genomics, 2013 - Springer
Background Cymbidium sinense belongs to the Orchidaceae, which is one of the most
abundant angiosperm families. C. sinense, a high-grade traditional potted flower, is most …

[HTML][HTML] Comparative Metabolomics Reveals Two Metabolic Modules Affecting Seed Germination in Rice (Oryza sativa)

H Guo, Y Lyv, W Zheng, C Yang, Y Li, X Wang, R Chen… - Metabolites, 2021 - mdpi.com
The process of seed germination is crucial not only for the completion of the plant life cycle
but also for agricultural production and food chemistry; however, the underlying metabolic …

[HTML][HTML] De novo transcriptome assembly and analysis of gene expression in different tissues of moth bean (Vigna aconitifolia) (Jacq.) Marechal

S Suranjika, S Pradhan, SS Nayak, A Parida - BMC Plant Biology, 2022 - Springer
Abstract Background The underutilized species Vigna aconitifolia (Moth Bean) is an
important legume crop cultivated in semi-arid conditions and is valued for its seeds for their …

Constructing the metabolic and regulatory pathways in germinating rice seeds through proteomic approach

D He, C Han, J Yao, S Shen, P Yang - Proteomics, 2011 - Wiley Online Library
Construction of metabolic and regulatory pathways from proteomic data can contextualize
the large‐scale data within the overall physiological scheme of an organism. It is an efficient …

[HTML][HTML] Genome-wide association mapping unravels the genetic control of seed germination and vigor in Brassica napus

SV Hatzig, M Frisch, F Breuer, N Nesi… - Frontiers in plant …, 2015 - frontiersin.org
Rapid and uniform seed germination is a crucial prerequisite for crop establishment and
high yield levels in crop production. A disclosure of genetic factors contributing to adequate …