[PDF][PDF] Linkage disequilibrium and heritability of copy-number polymorphisms within duplicated regions of the human genome

DP Locke, AJ Sharp, SA McCarroll, SD McGrath… - The American journal of …, 2006 - cell.com
Studies of copy-number variation and linkage disequilibrium (LD) have typically excluded
complex regions of the genome that are rich in duplications and prone to rearrangement. In …

[PDF][PDF] Segmental duplications and copy-number variation in the human genome

AJ Sharp, DP Locke, SD McGrath, Z Cheng… - The American Journal of …, 2005 - cell.com
The human genome contains numerous blocks of highly homologous duplicated sequence.
This higher-order architecture provides a substrate for recombination and recurrent …

A high-resolution survey of deletion polymorphism in the human genome

DF Conrad, TD Andrews, NP Carter, ME Hurles… - Nature …, 2006 - nature.com
Recent work has shown that copy number polymorphism is an important class of genetic
variation in human genomes,,,. Here we report a new method that uses SNP genotype data …

Chromosomal regions containing high-density and ambiguously mapped putative single nucleotide polymorphisms (SNPs) correlate with segmental duplications in …

X Estivill, J Cheung, M Angel Pujana… - Human molecular …, 2002 - academic.oup.com
We have explored the National Center for Biotechnology Information (NCBI) single
nucleotide polymorphisms (SNPs) database for a correlation between the density of putative …

Mutational and selective effects on copy-number variants in the human genome

GM Cooper, DA Nickerson, EE Eichler - Nature genetics, 2007 - nature.com
Comprehensive descriptions of large insertion/deletion or segmental duplication
polymorphisms (SDs) in the human genome have recently been generated. These …

[PDF][PDF] Population-genetic properties of differentiated human copy-number polymorphisms

CD Campbell, N Sampas, A Tsalenko… - The American Journal of …, 2011 - cell.com
Copy-number variants (CNVs) can reach appreciable frequencies in the human population,
and recent discoveries have shown that several of these copy-number polymorphisms …

Common deletions and SNPs are in linkage disequilibrium in the human genome

DA Hinds, AP Kloek, M Jen, X Chen, KA Frazer - Nature genetics, 2006 - nature.com
Humans show great variation in phenotypic traits such as height, eye color and susceptibility
to disease. Genomic DNA sequence differences among individuals are responsible for the …

[PDF][PDF] Linkage disequilibrium and inference of ancestral recombination in 538 single-nucleotide polymorphism clusters across the human genome

AG Clark, R Nielsen, J Signorovitch, TC Matise… - The American Journal of …, 2003 - cell.com
The prospect of using linkage disequilibrium (LD) for fine-scale mapping in humans has
attracted considerable attention, and, during the validation of a set of single-nucleotide …

[PDF][PDF] Linkage disequilibrium and allele-frequency distributions for 114 single-nucleotide polymorphisms in five populations

KAB Goddard, PJ Hopkins, JM Hall, JS Witte - The American Journal of …, 2000 - cell.com
Single-nucleotide polymorphisms (SNPs) may be extremely important for deciphering the
impact of genetic variation on complex human diseases. The ultimate value of SNPs for …

Natural genetic variation caused by small insertions and deletions in the human genome

RE Mills, WS Pittard, JM Mullaney, U Farooq… - Genome …, 2011 - genome.cshlp.org
Human genetic variation is expected to play a central role in personalized medicine. Yet
only a fraction of the natural genetic variation that is harbored by humans has been …