[HTML][HTML] Molecular basis for the allosteric activation mechanism of the heterodimeric imidazole glycerol phosphate synthase complex

JP Wurm, S Sung, AC Kneuttinger, E Hupfeld… - Nature …, 2021 - nature.com
Imidazole glycerol phosphate synthase (HisFH) is a heterodimeric bienzyme complex
operating at a central branch point of metabolism. HisFH is responsible for the HisH …

(Beta alpha) 8‐barrel proteins of tryptophan biosynthesis in the hyperthermophile Thermotoga maritima.

R Sterner, A Dahm, B Darimont, A Ivens, W Liebl… - The EMBO …, 1995 - embopress.org
To better understand the evolution of a key metabolic pathway, we have sequenced the
trpCFBA gene cluster of the hyperthermophilic bacterium Thermotoga maritima. The genes …

The folding pathway of triosephosphate isomerase

F Zárate-Pérez, ME Chánez-Cárdenas… - Progress in molecular …, 2008 - Elsevier
Publisher Summary This chapter discusses the folding pathway of triosephosphate
isomerase (TIM), which is a widely studied enzyme. The ubiquity, efficient catalytic activity …

Apparent Radii of the Native, Stable Intermediates and Unfolded Conformers of the α-Subunit of Tryptophan Synthase from E. coli, a TIM Barrel Protein

PJ Gualfetti, M Iwakura, JC Lee, H Kihara, O Bilsel… - Biochemistry, 1999 - ACS Publications
The urea-induced equilibrium unfolding of the α-subunit of tryptophan synthase (αTS) from
Escherichia coli can be described by a four-state model, N⇌ I1⇌ I2⇌ U, involving two highly …

Active site loop motion in triosephosphate isomerase: T-jump relaxation spectroscopy of thermal activation

R Desamero, S Rozovsky, N Zhadin, A McDermott… - Biochemistry, 2003 - ACS Publications
As for many enzymes, the enzymatic pathway of triosephosphate isomerase (TIM) includes
the partially rate determining motion of an active site loop (loop 6, residues 166− 176), which …

Structural Insights into the Mechanism of the PLP Synthase Holoenzyme from Thermotoga maritima,

F Zein, Y Zhang, YN Kang, K Burns, TP Begley… - Biochemistry, 2006 - ACS Publications
Pyridoxal 5 '-phosphate (PLP) is the biologically active form of vitamin B6 and is an
important cofactor for several of the enzymes involved in the metabolism of amine …

Structure of HisF, a histidine biosynthetic protein from Pyrobaculum aerophilum

MJ Banfield, JS Lott, VL Arcus, AA McCarthy… - … Section D: Biological …, 2001 - scripts.iucr.org
HisF (imidazole glycerol phosphate synthase) is an important branch-point enzyme in the
histidine biosynthetic pathway of microorganisms. Because of its potential relevance for …

Engineering the thermostability of a TIM-barrel enzyme by rational family shuffling

S Kamondi, A Szilágyi, L Barna, P Závodszky - … and biophysical research …, 2008 - Elsevier
A possible approach to generate enzymes with an engineered temperature optimum is to
create chimeras of homologous enzymes with different temperature optima. We tested this …

An allosteric pathway explains beneficial fitness in yeast for long‐range mutations in an essential TIM barrel enzyme

YH Chan, KB Zeldovich, CR Matthews - Protein Science, 2020 - Wiley Online Library
Protein evolution proceeds by a complex response of organismal fitness to mutations that
can simultaneously affect protein stability, structure, and enzymatic activity. To probe the …

Understanding protein lids: kinetic analysis of active hinge mutants in triosephosphate isomerase

J Sun, NS Sampson - Biochemistry, 1999 - ACS Publications
In previous work we tested what three amino acid sequences could serve as a protein hinge
in triosephosphate isomerase [Sun, J., and Sampson, NS (1998) Protein Sci. 7, 1495 …