Dynamic changes in the transcriptome landscape of Arabidopsis thaliana in response to cold stress

Y Liu, Y Cai, Y Li, X Zhang, N Shi, J Zhao… - Frontiers in Plant …, 2022 - frontiersin.org
Plants must reprogram gene expression to adapt constantly changing environmental
temperatures. With the increased occurrence of extremely low temperatures, the negative …

Genome-Wide Survey of Cold Stress Regulated Alternative Splicing in Arabidopsis thaliana with Tiling Microarray

N Leviatan, N Alkan, D Leshkowitz, R Fluhr - PloS one, 2013 - journals.plos.org
Alternative splicing plays a major role in expanding the potential informational content of
eukaryotic genomes. It is an important post-transcriptional regulatory mechanism that can …

Rapid and dynamic alternative splicing impacts the Arabidopsis cold response transcriptome

CPG Calixto, W Guo, AB James, NA Tzioutziou… - The Plant …, 2018 - academic.oup.com
Plants have adapted to tolerate and survive constantly changing environmental conditions
by reprogramming gene expression The dynamics of the contribution of alternative splicing …

Heat Stress Regulates the Expression of Genes at Transcriptional and Post-Transcriptional Levels, Revealed by RNA-seq in Brachypodium distachyon

S Chen, H Li - Frontiers in Plant Science, 2017 - frontiersin.org
Heat stress greatly affects plant growth/development and influences the output of crops. With
the increased occurrence of extreme high temperature, the negative influence on cereal …

[HTML][HTML] Full-length transcriptome sequencing provides insights into alternative splicing under cold stress in peanut

X Wang, Y Liu, L Ouyang, R Yao, T Yu, L Yan… - Frontiers in Plant …, 2024 - frontiersin.org
Introduction Peanut (Arachis hypogaea L.), also called groundnut is an important oil and
cash crop grown widely in the world. The annual global production of groundnuts has …

Third-generation sequencing found LncRNA associated with heat shock protein response to heat stress in Populus qiongdaoensis seedlings

J Xu, Y Zheng, S Pu, X Zhang, Z Li, J Chen - BMC genomics, 2020 - Springer
Background As air temperatures increase globally, more and more plants are exposed to
heat-stress conditions. Although many studies have explored regulation networks in plants …

Genome-scale cold stress response regulatory networks in ten Arabidopsis thalianaecotypes

P Barah, ND Jayavelu, S Rasmussen, HB Nielsen… - BMC genomics, 2013 - Springer
Background Low temperature leads to major crop losses every year. Although several
studies have been conducted focusing on diversity of cold tolerance level in multiple …

Third-Generation Sequencing Indicated that LncRNA Could Regulate eIF2D to Enhance Protein Translation Under Heat Stress in Populus simonii

J Xu, R Du, X Meng, W Zhao, L Kong… - Plant Molecular Biology …, 2021 - Springer
As global temperatures rise, plants are being increasingly exposed to high-temperature
stress. Although long non-coding RNAs (lncRNAs) are regulatory elements of gene …

Identification of tissue-specific and cold-responsive lncRNAs in Medicago truncatula by high-throughput RNA sequencing

M Zhao, T Wang, T Sun, X Yu, R Tian, WH Zhang - BMC plant biology, 2020 - Springer
Abstract Background Long non-coding RNAs (lncRNAs) play important roles in the
regulation of plant responses to environmental stress by acting as essential regulators of …

Genome-Wide Analysis of Gene Expression Provides New Insights into Cold Responses in Thellungiella salsuginea

J Wang, Q Zhang, F Cui, L Hou, S Zhao, H Xia… - Frontiers in plant …, 2017 - frontiersin.org
Low temperature is one of the major environmental stresses that affects plant growth and
development, and leads to decrease in crop yield and quality. Thellungiella salsuginea (salt …