Linkage of genomic biomarkers to whole organism end points in a toxicity identification evaluation (TIE)

AD Biales, M Kostich, RM Burgess, KT Ho… - … science & technology, 2013 - ACS Publications
Aquatic organisms are exposed to many toxic chemicals and interpreting the cause and
effect relationships between occurrence and impairment is difficult. Toxicity Identification …

Analysis of the Elodea nuttallii transcriptome in response to mercury and cadmium pollution: development of sensitive tools for rapid ecotoxicological testing

N Regier, L Baerlocher… - … science & technology, 2013 - ACS Publications
Toxic metals polluting aquatic ecosystems are taken up by inhabitants and accumulate in
the food web, affecting species at all trophic levels. It is therefore important to have good …

Transcriptome analysis in Parhyale hawaiensis reveal sex-specific responses to AgNP and AgCl exposure

MC Artal, KD Pereira, AD Luchessi, VK Okura… - Environmental …, 2020 - Elsevier
Abstract Analysis of the transcriptome of organisms exposed to toxicants offers new insights
for ecotoxicology, but further research is needed to enhance interpretation of results and …

Perspectives on the use of toxicogenomics to assess environmental risk

J Portugal, S Mansilla, B Piña - Frontiers in bioscience (Landmark …, 2022 - digital.csic.es
Environmental toxicogenomics aims to collect, analyze and interpret data on changes in
gene expression and protein activity resulting from exposure to toxic substances using high …

Genome-wide transcription profiles reveal genotype-dependent responses of biological pathways and gene-families in Daphnia exposed to single and mixed …

DIM De Coninck, J Asselman, S Glaholt… - … science & technology, 2014 - ACS Publications
The present study investigated the possibilities and limitations of implementing a genome-
wide transcription-based approach that takes into account genetic and environmental …

Transcriptomic, biochemical and individual markers in transplanted Daphnia magna to characterize impacts in the field

C Rivetti, B Campos, M Faria, NDC Català… - Science of the total …, 2015 - Elsevier
Daphnia magna individuals were transplanted across 12 sites from three Spanish river
basins (Llobregat, Ebro, Jucar) showing different sources of pollution. Gene transcription …

Daphnia magna and ecotoxicogenomics: gene expression profiles of the anti-ecdysteroidal fungicide fenarimol using energy-, molting-and life stage-related cDNA …

A Soetaert, K van der Ven, LN Moens, T Vandenbrouck… - Chemosphere, 2007 - Elsevier
In the present study, the existing life stage-specific cDNA library was extended with energy-
and molting-related genes using Suppression Subtractive Hybridization PCR and a …

The response of Isidorella newcombi to copper exposure: Using an integrated biological framework to interpret transcriptomic responses from RNA-seq analysis

RP Ubrihien, T Ezaz, AM Taylor, MM Stevens… - Aquatic Toxicology, 2017 - Elsevier
This study describes the transcriptomic response of the Australian endemic freshwater
gastropod Isidorella newcombi exposed to 80±1 μg/L of copper for 3 days. Analysis of …

RNA-Seq analysis of the toxicant-induced transcriptome of the marine diatom, Ceratoneis closterium

SE Hook, HL Osborn, F Gissi, P Moncuquet, NA Twine… - Marine genomics, 2014 - Elsevier
Diatoms are of enormous ecological importance as they account for as much as 20% of
global primary production, yet they are still understudied from a genomic perspective. The …

Ecotoxicogenomics: Emerging Technologies for Emerging Contaminants1

HC Poynton, CD Vulpe - JAWRA Journal of the American Water …, 2009 - Wiley Online Library
In recent years, new classes of aquatic pollutants have received attention from
environmentalists, scientists, and regulators due to their introduction into the environment …