Population-based 3D genome structure analysis reveals driving forces in spatial genome organization
Conformation capture technologies (eg, Hi-C) chart physical interactions between chromatin
regions on a genome-wide scale. However, the structural variability of the genome between …
regions on a genome-wide scale. However, the structural variability of the genome between …
Producing genome structure populations with the dynamic and automated PGS software
Chromosome conformation capture technologies such as Hi-C are widely used to
investigate the spatial organization of genomes. Because genome structures can vary …
investigate the spatial organization of genomes. Because genome structures can vary …
[HTML][HTML] Extensive heterogeneity and intrinsic variation in spatial genome organization
Several general principles of global 3D genome organization have recently been
established, including non-random positioning of chromosomes and genes in the cell …
established, including non-random positioning of chromosomes and genes in the cell …
Bayesian inference of spatial organizations of chromosomes
Knowledge of spatial chromosomal organizations is critical for the study of transcriptional
regulation and other nuclear processes in the cell. Recently, chromosome conformation …
regulation and other nuclear processes in the cell. Recently, chromosome conformation …
Sci-Hi-C: a single-cell Hi-C method for mapping 3D genome organization in large number of single cells
The highly dynamic nature of chromosome conformation and three-dimensional (3D)
genome organization leads to cell-to-cell variability in chromatin interactions within a cell …
genome organization leads to cell-to-cell variability in chromatin interactions within a cell …
Iterative correction of Hi-C data reveals hallmarks of chromosome organization
Extracting biologically meaningful information from chromosomal interactions obtained with
genome-wide chromosome conformation capture (3C) analyses requires the elimination of …
genome-wide chromosome conformation capture (3C) analyses requires the elimination of …
Exploring the three-dimensional organization of genomes: interpreting chromatin interaction data
How DNA is organized in three dimensions inside the cell nucleus and how this affects the
ways in which cells access, read and interpret genetic information are among the longest …
ways in which cells access, read and interpret genetic information are among the longest …
PHi-C: deciphering Hi-C data into polymer dynamics
S Shinkai, M Nakagawa, T Sugawara… - NAR genomics and …, 2020 - academic.oup.com
Genomes are spatiotemporally organized within the cell nucleus. Genome-wide
chromosome conformation capture (Hi-C) technologies have uncovered the 3D genome …
chromosome conformation capture (Hi-C) technologies have uncovered the 3D genome …
Hi-C 2.0: An optimized Hi-C procedure for high-resolution genome-wide mapping of chromosome conformation
Chromosome conformation capture-based methods such as Hi-C have become mainstream
techniques for the study of the 3D organization of genomes. These methods convert …
techniques for the study of the 3D organization of genomes. These methods convert …