[HTML][HTML] CancerModels. Org–an open global research platform for patient-derived cancer models

Z Perova, M Martinez, T Mandloi, MR Almanza… - network.febs.org
Patient-derived cancer models (PDCMs) are created from tumor samples belonging to
individual patients, to mimic as close as possible the underlying characteristics of the …

Model-based cancer therapy selection by linking tumor vulnerabilities to drug mechanism

S Tarapcsak, Y Qiao, X Huang, TD Sera, MH Bailey… - Cancer Research, 2022 - AACR
Selection of the treatments most likely to combat a patient's tumor is a central aim of
precision oncology. We are currently developing a functional precision oncology program at …

Abstract C068: Construction of preclinical study model for optimal anticancer drug selection using PDX model in pancreatic cancer

R Tanaka, K Kimura, N Tani, S Eguchi, K Kageyama… - Cancer Research, 2024 - AACR
Background: Translational research using the patient-derived xenograft (PDX) model is
progressing rapidly and is also becoming widespread in pancreatic cancer research. Since …

Systematic evaluation and comparison of drug response prediction models: a case study of prediction generalization across cell lines datasets

A Partin, TS Brettin, Y Zhu, J Overbeek… - Cancer …, 2023 - aacrjournals.org
Predictive modeling holds great promise for improving personalized cancer treatment and
efficiency of drug development. In recent years, deep learning (DL) has been extensively …

[引用][C] A new computational framework for predicting cancer drug response

I Cosentini, G Locicero, A Ferro, S Alaimo, A Pulvirenti - BLENDING BIOLOGY AND …

A systematic analysis of genomics-based modeling approaches for prediction of drug response to cytotoxic chemotherapies

JD Mannheimer, DL Duval, A Prasad… - BMC medical …, 2019 - Springer
Background The availability and generation of large amounts of genomic data has led to the
development of a new paradigm in cancer treatment emphasizing a precision approach at …

Prediction of oncology treatment outcomes

S Cui, I El Naqa - Machine and Deep Learning in Oncology, Medical …, 2022 - Springer
Abstract Treatment outcomes in oncology are determined by complex interactions among
treatment, anatomical, and patient-related variables. A key component of oncology research …

Drug response prediction in patient-derived xenografts with data augmentation and multimodal deep learning.

A Partin, TS Brettin, Y Zhu, M Shukla, F Xia, H Yoo… - 2022 - ascopubs.org
e13572 Background: Prediction of drug response is a critical research area in precision
oncology and has been previously explored with large drug screening studies of cancer cell …

Methodological challenges in translational drug response modeling in cancer: a systematic analysis with FORESEE

LK Schätzle, A Hadizadeh Esfahani… - PLoS Computational …, 2020 - journals.plos.org
Translational models directly relating drug response specific processes that can be
observed in vitro to their in vivo role in cancer patients constitute a crucial part of the …

[PDF][PDF] Designing DNA-based predictors of drug response using the signal joint with gene expression

SMC Mourragui, M Loog, M van Nee - scholar.archive.org
Motivation: Anti-cancer drugs may elicit resistance or sensitivity through mechanisms which
involve several genomic layers. Nevertheless, we have demonstrated that gene expression …