Multi-omics-based Drug Response Prediction of Cancer Cell Lines with DELFOS
LFC Piochi - 2023 - estudogeral.uc.pt
Cancer is currently one of the most notorious diseases, with over one million deaths in the
European Union alone in 2022. What makes it truly devastating is its heterogeneity, as each …
European Union alone in 2022. What makes it truly devastating is its heterogeneity, as each …
Multitask learning improves prediction of cancer drug sensitivity
Precision oncology seeks to predict the best therapeutic option for individual patients based
on the molecular characteristics of their tumors. To assess the preclinical feasibility of drug …
on the molecular characteristics of their tumors. To assess the preclinical feasibility of drug …
Predicting cancer drug response in vivo by learning an optimal feature selection of tumour molecular profiles
(1) Background: Inter-tumour heterogeneity is one of cancer's most fundamental features.
Patient stratification based on drug response prediction is hence needed for effective anti …
Patient stratification based on drug response prediction is hence needed for effective anti …
PRECISE: a domain adaptation approach to transfer predictors of drug response from pre-clinical models to tumors
Motivation Cell lines and patient-derived xenografts (PDXs) have been used extensively to
understand the molecular underpinnings of cancer. While core biological processes are …
understand the molecular underpinnings of cancer. While core biological processes are …
Independent validation of a model using cell line chemosensitivity to predict response to therapy
W Wang, KA Baggerly, S Knudsen… - Journal of the …, 2013 - academic.oup.com
Background Methods using cell line microarray and drug sensitivity data to predict patients'
chemotherapy response are appealing, but groups may be reluctant to release details to …
chemotherapy response are appealing, but groups may be reluctant to release details to …
[PDF][PDF] Gene expression based inference of drug resistance in cancer
CC Hollier, D Sengupta - academia.edu
Inter and intra-tumoral heterogeneity are major stumbling blocks in the treatment of cancer
and are responsible for imparting differential drug responses in cancer patients. Recently …
and are responsible for imparting differential drug responses in cancer patients. Recently …
Modeling multi-drug chemotherapy: tailoring treatment to individuals
SN Gardner - Journal of theoretical biology, 2002 - Elsevier
Background: Predicting and tailoring optimal cancer treatments presents a major challenge.
Methods: A computational model (kinetically tailored treatment, or KITT model) is developed …
Methods: A computational model (kinetically tailored treatment, or KITT model) is developed …
A patient-centric repository of PDX models for translational oncology research
TO Khor, I Ben Zvi, A Katz, D Vasquez-Dunddel… - Cancer research, 2015 - AACR
Patient-derived xenograft (PDX) models maintain the complex intra-tumoral biology and
heterogeneity of an intact malignancy, as well as the interplay with stromal components and …
heterogeneity of an intact malignancy, as well as the interplay with stromal components and …
[HTML][HTML] Forecasting drug responses
S Crunkhorn - Nature Reviews Drug Discovery, 2007 - nature.com
The US National Cancer Institute has screened more than 100,000 anticancer compounds
using a panel of 60 diverse human cancer cell lines (NCI-60), which has provided a rich …
using a panel of 60 diverse human cancer cell lines (NCI-60), which has provided a rich …
Deep learning transcriptomic model for prediction of pan-drug chemotherapeutic sensitivity
The emergence of precision oncology approaches has begun to inform clinical decision-
making in diagnostic, prognostic, and treatment contexts. High-throughput technology has …
making in diagnostic, prognostic, and treatment contexts. High-throughput technology has …