[HTML][HTML] A multilocus timescale for oomycete evolution estimated under three distinct molecular clock models

NH Matari, JE Blair - BMC Evolutionary Biology, 2014 - Springer
Background Molecular clock methodologies allow for the estimation of divergence times
across a variety of organisms; this can be particularly useful for groups lacking robust fossil …

Dating the molecular clock in fungi–how close are we?

ML Berbee, JW Taylor - Fungal Biology Reviews, 2010 - Elsevier
Integration of fungal evolution with the dates of plate tectonic movements, paleoecology, and
the evolution of plants and animals requires a molecular clock. Imperfect though they may …

Estimating the timing of early eukaryotic diversification with multigene molecular clocks

LW Parfrey, DJG Lahr, AH Knoll… - Proceedings of the …, 2011 - National Acad Sciences
Although macroscopic plants, animals, and fungi are the most familiar eukaryotes, the bulk
of eukaryotic diversity is microbial. Elucidating the timing of diversification among the more …

The molecular clock as a tool for understanding host-parasite evolution

RCM Warnock, J Engelstädter - The Evolution and Fossil Record of …, 2021 - Springer
The molecular clock in combination with evidence from the geological record can be applied
to infer the timing and dynamics of evolutionary events. This has enormous potential to shed …

Dating the arthropod tree based on large-scale transcriptome data

P Rehm, J Borner, K Meusemann… - Molecular Phylogenetics …, 2011 - Elsevier
Molecular sequences do not only allow the reconstruction of phylogenetic relationships
among species, but also provide information on the approximate divergence times. Whereas …

[HTML][HTML] Dating the diversification of the major lineages of Ascomycota (Fungi)

M Prieto, M Wedin - PloS one, 2013 - journals.plos.org
Establishing the dates for the origin and main diversification events in the phylogeny of
Ascomycota is among the most crucial remaining goals in understanding the evolution of …

The origin and diversification of eukaryotes: problems with molecular phylogenetics and molecular clock estimation

AJ Roger, LA Hug - … Transactions of the Royal Society B …, 2006 - royalsocietypublishing.org
Determining the relationships among and divergence times for the major eukaryotic
lineages remains one of the most important and controversial outstanding problems in …

[HTML][HTML] Inferring clocks when lacking rocks: the variable rates of molecular evolution in bacteria

CH Kuo, H Ochman - Biology Direct, 2009 - Springer
Background Because bacteria do not have a robust fossil record, attempts to infer the timing
of events in their evolutionary history requires comparisons of molecular sequences. This …

Comparative analysis of oomycete genome evolution using the oomycete gene order browser (OGOB)

J McGowan, KP Byrne… - Genome biology and …, 2019 - academic.oup.com
The oomycetes are a class of microscopic, filamentous eukaryotes within the stramenopiles–
alveolates–rhizaria eukaryotic supergroup. They include some of the most destructive …

Dynamics and innovations within oomycete genomes: insights into biology, pathology, and evolution

HS Judelson - Eukaryotic Cell, 2012 - Am Soc Microbiol
The eukaryotic microbes known as oomycetes are common inhabitants of terrestrial and
aquatic environments and include saprophytes and pathogens. Lifestyles of the pathogens …