Cross-platform comparison of methods for quantitative metabolomics of primary metabolism
Quantitative metabolomics is under intense development, and no commonly accepted
standard analytical technique has emerged, yet. The employed analytical methods were …
standard analytical technique has emerged, yet. The employed analytical methods were …
Algorithms and tools for the preprocessing of LC–MS metabolomics data
S Castillo, P Gopalacharyulu, L Yetukuri… - … and Intelligent Laboratory …, 2011 - Elsevier
Metabolomics encompasses the study of small molecules in a biological sample. Liquid
Chromatography coupled with Mass Spectrometry (LC–MS) profiling is an important …
Chromatography coupled with Mass Spectrometry (LC–MS) profiling is an important …
Globally optimized targeted mass spectrometry: reliable metabolomics analysis with broad coverage
Targeted detection is one of the most important methods in mass spectrometry (MS)-based
metabolomics; however, its major limitation is the reduced metabolome coverage that results …
metabolomics; however, its major limitation is the reduced metabolome coverage that results …
Understanding metabolomics in biomedical research
SJ Kim, SH Kim, JH Kim, S Hwang… - Endocrinology and …, 2016 - synapse.koreamed.org
The term" omics" refers to any type of specific study that provides collective information on a
biological system. Representative omics includes genomics, proteomics, and metabolomics …
biological system. Representative omics includes genomics, proteomics, and metabolomics …
Targeted metabolomics
LD Roberts, AL Souza, RE Gerszten… - Current protocols in …, 2012 - Wiley Online Library
The metabolome is the terminal downstream product of the genome and consists of the total
complement of all the low‐molecular‐weight molecules (metabolites) in a cell, tissue, or …
complement of all the low‐molecular‐weight molecules (metabolites) in a cell, tissue, or …
A large-scale analysis of targeted metabolomics data from heterogeneous biological samples provides insights into metabolite dynamics
HJ Lee, DM Kremer, P Sajjakulnukit, L Zhang… - Metabolomics, 2019 - Springer
Introduction We previously developed a tandem mass spectrometry-based label-free
targeted metabolomics analysis framework coupled to two distinct chromatographic …
targeted metabolomics analysis framework coupled to two distinct chromatographic …
Navigating freely-available software tools for metabolomics analysis
Introduction The field of metabolomics has expanded greatly over the past two decades,
both as an experimental science with applications in many areas, as well as in regards to …
both as an experimental science with applications in many areas, as well as in regards to …
LargeMetabo: an out-of-the-box tool for processing and analyzing large-scale metabolomic data
Q Yang, B Li, P Wang, J Xie, Y Feng… - Briefings in …, 2022 - academic.oup.com
Large-scale metabolomics is a powerful technique that has attracted widespread attention in
biomedical studies focused on identifying biomarkers and interpreting the mechanisms of …
biomedical studies focused on identifying biomarkers and interpreting the mechanisms of …
[HTML][HTML] Annotation: a computational solution for streamlining metabolomics analysis
X Domingo-Almenara, JR Montenegro-Burke… - Analytical …, 2018 - ncbi.nlm.nih.gov
Metabolite identification is still considered an imposing bottleneck in liquid chromatography
mass spectrometry (LC/MS) untargeted metabolomics. The identification workflow usually …
mass spectrometry (LC/MS) untargeted metabolomics. The identification workflow usually …
Good practices and recommendations for using and benchmarking computational metabolomics metabolite annotation tools
NF de Jonge, K Mildau, D Meijer, JJR Louwen… - Metabolomics, 2022 - Springer
Background Untargeted metabolomics approaches based on mass spectrometry obtain
comprehensive profiles of complex biological samples. However, on average only 10% of …
comprehensive profiles of complex biological samples. However, on average only 10% of …