[HTML][HTML] Genome-wide analysis reveals rapid and dynamic changes in miRNA and siRNA sequence and expression during ovule and fiber development in …

M Pang, AW Woodward, V Agarwal, X Guan, M Ha… - Genome Biology, 2009 - Springer
Background Cotton fiber development undergoes rapid and dynamic changes in a single
cell type, from fiber initiation, elongation, primary and secondary wall biosynthesis, to fiber …

De Novo Genome Sequence Assemblies of Gossypium raimondii and Gossypium turneri

JA Udall, E Long, C Hanson, D Yuan… - G3: Genes …, 2019 - academic.oup.com
Cotton is an agriculturally important crop. Because of its importance, a genome sequence of
a diploid cotton species (Gossypium raimondii, D-genome) was first assembled using …

COTTONOMICS: a comprehensive cotton multi-omics database

F Dai, J Chen, Z Zhang, F Liu, J Li, T Zhao, Y Hu… - Database, 2022 - academic.oup.com
The rapid advancement of sequencing technology, including next-generation sequencing
(NGS), has greatly improved sequencing efficiency and decreased cost. Consequently …

[HTML][HTML] Transcriptome Analysis in Cotton Boll Weevil (Anthonomus grandis) and RNA Interference in Insect Pests

AAP Firmino, FCA Fonseca, LLP de Macedo… - PloS one, 2013 - journals.plos.org
Cotton plants are subjected to the attack of several insect pests. In Brazil, the cotton boll
weevil, Anthonomus grandis, is the most important cotton pest. The use of insecticidal …

[HTML][HTML] Transcriptome Analysis Reveals the Defense Mechanism of Cotton against Verticillium dahliae Induced by Hypovirulent Fungus Gibellulopsis nigrescens …

Z Feng, F Wei, H Feng, Y Zhang, L Zhao… - International Journal of …, 2023 - mdpi.com
Verticillium wilt is a kind of plant vascular disease caused by the soilborne fungus
Verticillium dahliae, which severely limits cotton production. Our previous studies showed …

[HTML][HTML] Transcriptome, proteome and functional characterization reveals salt stress tolerance mechanisms in upland cotton (Gossypium hirsutum L.)

K Sun, TG Mehari, H Fang, J Han, X Huo… - Frontiers in Plant …, 2023 - frontiersin.org
Uncovering the underlying mechanism of salt tolerance is important to breed cotton varieties
with improved salt tolerance. In this study, transcriptome and proteome sequencing were …

A microsatellite-based, gene-rich linkage map reveals genome structure, function and evolution in Gossypium

W Guo, C Cai, C Wang, Z Han, X Song, K Wang… - Genetics, 2007 - academic.oup.com
The mapping of functional genes plays an important role in studies of genome structure,
function, and evolution, as well as allowing gene cloning and marker-assisted selection to …

Analysis of cotton (Gossypium hirsutum) root proteomes during a compatible interaction with the black root rot fungus Thielaviopsis basicola

JVF Coumans, A Poljak, MJ Raftery, D Backhouse… - …, 2009 - Wiley Online Library
A proteomic approach was used to uncover the inducible molecular defense mechanism of
cotton root occurring during the compatible interaction with Thielaviopsis basicola …

[HTML][HTML] Comparative transcriptome analysis provides insights into the seed germination in cotton in response to chilling stress

Q Shen, S Zhang, S Liu, J Chen, H Ma, Z Cui… - International Journal of …, 2020 - mdpi.com
Gossypium hirsutum L., is a widely cultivated cotton species around the world, but its
production is seriously threatened by its susceptibility to chilling stress. Low temperature …

[HTML][HTML] Genome wide expression profiling of two accession of G. herbaceum L. in response to drought

A Ranjan, D Nigam, MH Asif, R Singh, S Ranjan… - BMC genomics, 2012 - Springer
Background Genome-wide gene expression profiling and detailed physiological
investigation were used for understanding the molecular mechanism and physiological …