Molecular signatures of natural selection
R Nielsen - Annu. Rev. Genet., 2005 - annualreviews.org
There is an increasing interest in detecting genes, or genomic regions, that have been
targeted by natural selection. The interest stems from a basic desire to learn more about …
targeted by natural selection. The interest stems from a basic desire to learn more about …
Detecting the form of selection from DNA sequence data
SP Otto - Trends in Genetics, 2000 - cell.com
Clues to our evolutionary history lie hidden within DNA sequence data. One of the great
challenges facing population geneticists is to identify and accurately interpret these clues …
challenges facing population geneticists is to identify and accurately interpret these clues …
Detecting natural selection in genomic data
JJ Vitti, SR Grossman, PC Sabeti - Annual review of genetics, 2013 - annualreviews.org
The past fifty years have seen the development and application of numerous statistical
methods to identify genomic regions that appear to be shaped by natural selection. These …
methods to identify genomic regions that appear to be shaped by natural selection. These …
“Reverse ecology” and the power of population genomics
Rapid and inexpensive sequencing technologies are making it possible to collect whole
genome sequence data on multiple individuals from a population. This type of data can be …
genome sequence data on multiple individuals from a population. This type of data can be …
Statistical tests of selective neutrality in the age of genomics
R Nielsen - Heredity, 2001 - nature.com
Examining genomic data for traces of selection provides a powerful tool for identifying
genomic regions of functional importance. Many methods for identifying such regions have …
genomic regions of functional importance. Many methods for identifying such regions have …
Detecting positive selection in the genome
TR Booker, BC Jackson, PD Keightley - BMC biology, 2017 - Springer
Population geneticists have long sought to understand the contribution of natural selection
to molecular evolution. A variety of approaches have been proposed that use population …
to molecular evolution. A variety of approaches have been proposed that use population …
Gene expression levels are a target of recent natural selection in the human genome
S Kudaravalli, JB Veyrieras, BE Stranger… - Molecular biology …, 2009 - academic.oup.com
Abstract Changes in gene expression may represent an important mode of human
adaptation. However, to date, there are relatively few known examples in which selection …
adaptation. However, to date, there are relatively few known examples in which selection …
Inference of natural selection from interspersed genomic elements based on polymorphism and divergence
Complete genome sequences contain valuable information about natural selection, but this
information is difficult to access for short, widely scattered noncoding elements such as …
information is difficult to access for short, widely scattered noncoding elements such as …
Simultaneous inference of selection and population growth from patterns of variation in the human genome
SH Williamson, R Hernandez… - Proceedings of the …, 2005 - National Acad Sciences
Natural selection and demographic forces can have similar effects on patterns of DNA
polymorphism. Therefore, to infer selection from samples of DNA sequences, one must …
polymorphism. Therefore, to infer selection from samples of DNA sequences, one must …
Joint analysis of demography and selection in population genetics: where do we stand and where could we go?
Teasing apart the effects of selection and demography on genetic polymorphism remains
one of the major challenges in the analysis of population genomic data. The traditional …
one of the major challenges in the analysis of population genomic data. The traditional …