Three-dimensional genome architecture: players and mechanisms
A Pombo, N Dillon - Nature reviews Molecular cell biology, 2015 - nature.com
The different cell types of an organism share the same DNA, but during cell differentiation
their genomes undergo diverse structural and organizational changes that affect gene …
their genomes undergo diverse structural and organizational changes that affect gene …
Understanding 3D genome organization by multidisciplinary methods
I Jerkovic, G Cavalli - Nature Reviews Molecular Cell Biology, 2021 - nature.com
Understanding how chromatin is folded in the nucleus is fundamental to understanding its
function. Although 3D genome organization has been historically difficult to study owing to a …
function. Although 3D genome organization has been historically difficult to study owing to a …
The three-dimensional organization of mammalian genomes
Animal development depends on not only the linear genome sequence that embeds millions
of cis-regulatory elements, but also the three-dimensional (3D) chromatin architecture that …
of cis-regulatory elements, but also the three-dimensional (3D) chromatin architecture that …
[HTML][HTML] The era of 3D and spatial genomics
BAM Bouwman, N Crosetto, M Bienko - Trends in genetics, 2022 - cell.com
Over a decade ago the advent of high-throughput chromosome conformation capture (Hi-C)
sparked a new era of 3D genomics. Since then the number of methods for mapping the 3D …
sparked a new era of 3D genomics. Since then the number of methods for mapping the 3D …
[HTML][HTML] Microscopy-based chromosome conformation capture enables simultaneous visualization of genome organization and transcription in intact organisms
Eukaryotic chromosomes are organized in multiple scales, from nucleosomes to
chromosome territories. Recently, genome-wide methods identified an intermediate level of …
chromosome territories. Recently, genome-wide methods identified an intermediate level of …
[HTML][HTML] Chromosome conformation capture technologies and their impact in understanding genome function
It has been more than a decade since the first chromosome conformation capture (3C) assay
was described. The assay was originally devised to measure the frequency with which two …
was described. The assay was originally devised to measure the frequency with which two …
Hi-C: a method to study the three-dimensional architecture of genomes.
NL Van Berkum, E Lieberman-Aiden, L Williams… - JoVE (Journal of …, 2010 - jove.com
The three-dimensional folding of chromosomes compartmentalizes the genome and and
can bring distant functional elements, such as promoters and enhancers, into close spatial …
can bring distant functional elements, such as promoters and enhancers, into close spatial …
The role of 3D genome organization in development and cell differentiation
In eukaryotes, the genome does not exist as a linear molecule but instead is hierarchically
packaged inside the nucleus. This complex genome organization includes multiscale …
packaged inside the nucleus. This complex genome organization includes multiscale …
Chromatin globules: a common motif of higher order chromosome structure?
Recent technological advances in the field of chromosome conformation capture are
facilitating tremendous progress in the ability to map the three-dimensional (3D) …
facilitating tremendous progress in the ability to map the three-dimensional (3D) …