[HTML][HTML] Higher-order chromosomal structures mediate genome function
How chromosomes are organized within the tridimensional space of the nucleus and how
can this organization affect genome function have been long-standing questions on the path …
can this organization affect genome function have been long-standing questions on the path …
[HTML][HTML] Multiscale 3D genome rewiring during mouse neural development
Chromosome conformation capture technologies have revealed important insights into
genome folding. Yet, how spatial genome architecture is related to gene expression and cell …
genome folding. Yet, how spatial genome architecture is related to gene expression and cell …
[HTML][HTML] 3C and 3C-based techniques: the powerful tools for spatial genome organization deciphering
J Han, Z Zhang, K Wang - Molecular Cytogenetics, 2018 - Springer
It is well known that the chromosomes are organized in the nucleus and this spatial
arrangement of genome play a crucial role in gene regulation and genome stability. Different …
arrangement of genome play a crucial role in gene regulation and genome stability. Different …
[HTML][HTML] Genome-scale imaging of the 3D organization and transcriptional activity of chromatin
The 3D organization of chromatin regulates many genome functions. Our understanding of
3D genome organization requires tools to directly visualize chromatin conformation in its …
3D genome organization requires tools to directly visualize chromatin conformation in its …
The spatial organization of transcriptional control
A Hafner, A Boettiger - Nature Reviews Genetics, 2023 - nature.com
In animals, the sequences for controlling gene expression do not concentrate just at the
transcription start site of genes, but are frequently thousands to millions of base pairs distal …
transcription start site of genes, but are frequently thousands to millions of base pairs distal …
[HTML][HTML] 3C-based technologies to study the shape of the genome
Ever since microscopes enabled visualization of the organization of eukaryotic cells,
scientists have been fascinated by the function and structure of their largest organelle, the …
scientists have been fascinated by the function and structure of their largest organelle, the …
An overview of genome organization and how we got there: from FISH to Hi-C
J Fraser, I Williamson, WA Bickmore… - … and Molecular Biology …, 2015 - Am Soc Microbiol
In humans, nearly two meters of genomic material must be folded to fit inside each
micrometer-scale cell nucleus while remaining accessible for gene transcription, DNA …
micrometer-scale cell nucleus while remaining accessible for gene transcription, DNA …
Genome structure determination via 3C-based data integration by the Integrative Modeling Platform
D Bau, MA Marti-Renom - Methods, 2012 - Elsevier
The three-dimensional (3D) architecture of a genome determines the spatial localization of
regulatory elements and the genes they regulate. Thus, elucidating the 3D structure of a …
regulatory elements and the genes they regulate. Thus, elucidating the 3D structure of a …
[HTML][HTML] Resolving the 3D landscape of transcription-linked mammalian chromatin folding
Whereas folding of genomes at the large scale of epigenomic compartments and
topologically associating domains (TADs) is now relatively well understood, how chromatin …
topologically associating domains (TADs) is now relatively well understood, how chromatin …