Analysis of long-range chromatin interactions using Chromosome Conformation Capture

N Naumova, EM Smith, Y Zhan, J Dekker - Methods, 2012 - Elsevier
Chromosome Conformation Capture, or 3C, is a pioneering method for investigating the
three-dimensional structure of chromatin. 3C is used to analyze long-range looping …

The contribution of nuclear compartmentalization to gene regulation

M Carmo-Fonseca - Cell, 2002 - cell.com
Recent developments in live-cell imaging are challenging our stereotyped view of the fixed
cell nucleus. The emerging picture is that nuclear processes may rely on a constant flow of …

The role of nuclear organization in cancer

E Lever, D Sheer - The Journal of Pathology: A Journal of the …, 2010 - Wiley Online Library
The functional significance of changes in nuclear structure and organization in transformed
cells remains one of the most enigmatic questions in cancer biology. In this review, we …

Nuclear compartments and gene regulation

M Cockell, SM Gasser - Current opinion in genetics & development, 1999 - Elsevier
Improvements in fluorescence microscopy have allowed us to explore the three-dimensional
organization of the nucleus in ways that were impossible ten years ago, revealing …

Half a century of “the nuclear matrix”

T Pederson - Molecular biology of the cell, 2000 - Am Soc Cell Biol
A cell fraction that would today be termed “the nuclear matrix” was first described and
patented in 1948 by Russian investigators. In 1974 this fraction was rediscovered and …

Concepts in nuclear architecture

T Misteli - Bioessays, 2005 - Wiley Online Library
Genomes are defined by their primary sequence. The functional properties of genomes,
however, are determined by far more complex mechanisms and depend on multiple layers …

On emerging nuclear order

I Rajapakse, M Groudine - Journal of Cell Biology, 2011 - rupress.org
Although the nonrandom nature of interphase chromosome arrangement is widely accepted,
how nuclear organization relates to genomic function remains unclear. Nuclear …